Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00750 ATGGAAACAAACATGTCAACAACAACTTTAGGTTACAATagagattcttcttcttcttcaccacCTCAACAAGTTCACACATTAATCTTCAATAATCAAACTCAATTTTCACATAATCTTCATCCACCACCACCTTCTCAAACACCAATCACAGATCCAGATCTAACCGTTAtagcaccaccaccaccaccaacaccacaacaacaacaacaaacaaaaacattttatcgAGAATGTCTGAGAAACCACGCGGCAAGCATGGGAAGCCACGTGGTAGATGGTTGTGGAGAATTCATGCCAAGTGGTGAAGAAGGTACACCACAATCATTTCTATGTGCCGCTTGTAACTGTCACCGTAATTTTCATCGAAAACATATTCAACaacttcatcaacaacaacaacaaacacaaaatgttcaaaatgttgttgaaaatgTTATTCATGTTCCTAATTTTCATacaccttcatcatcatcacaaagATTTTCACATCCTAATTCTTCACAACAACAAGCTATTGTTGTTCCACCGTTgatgatgaattttggatcagGAGCAGCAGAATCATCAAGTGAAGATCTAAACATGTCAGGTGCAGAATTTTCAATTCAGAATCAACAGAATAAGAAATCGGTTTTGAAGAAGAGGATAAGGACGAAATTCTCGCAGGAACAAAAGGATAAGATGATGGAGTTTGGTGAAAAAATTGGATGGAAGATTCAAAAACATGATGAACATGAAGTTCAACAGTTTTGTTCACAAGTTGGTATTAAGAGACAAGTTTTTAAAGTTTGGATGCATAATAATAAACAAGCTatgaagaaacaacaacaacaacaaatgtAA 846 0.273 METNMSTTTLGYNRDSSSSSPPQQVHTLIFNNQTQFSHNLHPPPPSQTPITDPDLTVIAPPPPPTPQQQQQTKTFYRECLRNHAASMGSHVVDGCGEFMPSGEEGTPQSFLCAACNCHRNFHRKHIQQLHQQQQQTQNVQNVVENVIHVPNFHTPSSSSQRFSHPNSSQQQAIVVPPLMMNFGSGAAESSSEDLNMSGAEFSIQNQQNKKSVLKKRIRTKFSQEQKDKMMEFGEKIGWKIQKHDEHEVQQFCSQVGIKRQVFKVWMHNNKQAMKKQQQQQM 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00750 281 MobiDBLite consensus disorder prediction 1 24 - -
Tsu05g00750 281 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 17 276 - -
Tsu05g00750 281 Pfam ZF-HD protein dimerisation region 74 126 IPR006456 -
Tsu05g00750 281 Gene3D - 199 276 - -
Tsu05g00750 281 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 7 17 276 - -
Tsu05g00750 281 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 76 125 IPR006456 -
Tsu05g00750 281 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 76 125 IPR006456 -
Tsu05g00750 281 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 214 271 IPR006455 -
Tsu05g00750 281 SUPERFAMILY Homeodomain-like 207 275 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00750 Tsu-Chr5 6324737 6326491 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00750 51 276 ZF-HD Transcription Factor Family AT2G18350 50.000 3.78e-65 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Tsu05g00750 ZF-HD_dimer 9.9e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00750 - - mtr:MTR_5g020510 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00750 05 6324737 6326491 Tsu05g00750 05 6324737 6326491 ECH