Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00734 ATGAATTTGAATGTCATTTTACGTGTTAGAAAGAAGACTGGAAGTACTGCTATTTCTGGGATAATTTTTCCAATGGCGATGGGACCAGCTTTATACGCTCTACATCGAAAATTTTACAAAGGTAATGTTGAACTTGAAGAAAGTACACTGGGTGCTTATGTACTTTGGACTTTGGTACTCACAGTAACAGGTTTTCCAGTTTTAGCTCACACCCTTTCTGAGCTCAAACTTCTTTATACCGGTCTTGGTGAGGCCGCATTAACAACGGCTATGCTCAGCGACACATATGCTTGGGTTTTATTCACATTATTTGTTCCATTTTCAATCAATGGTAAAGGGGCAATATACTCTGTGGTAAGCACTAtagtatttattttcatttgcaTCTTTGTGGTGCGTCCTATCATTGTGAAGGTCATTGATCGCAAGACAGAAAATGATGAGTGGGATGATAACAAATTGCTATTTGTGGTGATGGGGCTTTTGATTTGCTCACAAATAACAGATGTTCTCGGTACACATGCCGTTGTTGGGGCTTTTGTGTACGGGTTGATTTTACCTCATGGTAAATTTGCAGACATGGTGGTGTCAGCCTCAGATGATTTTGCTGGTGGATTTTTGGCACCACTTTTCTTTAGTGGCACGGGAATGAGACTCACGGTGCGCCAAATTTTCGAACAGCCTAATTGGCCTTTGACGCTTATGATAATTCTCTTGTTGTGTTCTATAAAGATTTTAAGCACTTTACTTGCGACATTCTTTTTTGGCATGCGTTCGCGAGACGGTTTTGCTCTAGGATTGCTTCTCAATACCAAGGGTGTCATTGCTTTTATAATGCTCAACATTGCATGGGATAGATCGATTCTTGCAGGACCAACTTACACTGTTTTAACATCTGGAGTCCTTTTAATGACAATATTGGTGCCTCCCATTGTCAATGCAATATACAAACCCAGAAAACGATTTGAGCGAAACAAGCTAAAGACTATGCAAAAGTTAAGACTTGATGTAGAGCTTAGGATTCTAGCATGTGTTCACAATACTCGTCATGCTACGGGGATTATTAGCCTCATCGAATCTTTCAATGCCACTAGACTTTCACCGATACATGTTTTTTCACTTTATCTTGTTGAGCTCACAGGACGTGCTGGTGCACTTGTTGCTGCTCATATGGAGAAGCCTAGTGGCCAACTTGGAGCACAAAATCTTACAAGATCCCAGGAAGAGCTAGAAAGTATTAATAGTATCTTTGGAGCActtgaagaaaaatatgatgCTATCAGAGTGGAAACCTTGAATGTTGTTTCATCTTATGCAACCATTCACGAAGACATATACAACTCTGCTAATGATAAACGAACAAGCTTGATTATCCTTCCATTCCACAAACAAGTAAGTTCAGAAGGTGCACTTGAAACAACTAGTATTGCATACAAAGATATAAACGTGAATGTGATGCAAAGTGCACCTTGCTCTGTGGGAATCTTTGTTGACCGTGATCTTGGGCTATTATcgaaattgaaattttgtattCGTATGATCTTTATTGGAGGTCCTGACGATCGTGAAGCCTTAGCTGTTGCATGGAGGATGGCTGGGCACCCAGGAGCTCGATTATCAGTGGTTCGAATGCTCTTGTTTGATGAAGCTGCAGAAGTAGACACCTCAAGTCACAATGAAGCACAAGGCATACTATCTGTTGTAATGGATAATGATATGCAAAATGACTTAGACGATGAGTATCTTAATTCCTTTAGACTGACCGCAGTGAACAACAATGATTCTATATCCTATTCAGAGGTTGATGTTCATTCAGGTGACGATATTCCCATAGTCCTCAATGAGCTAGAGAATTTAGGTTGCGATTTATATATAGTTGGACAAGGGAATCGTAGGAGCTCTCAAgtcttttcaaatttattggaATGGTGTGATTGTTCAGAACTTGGAGTTATAGGGGATATGTTGGCCTCAAACAATTTTGGTTCCCAGTCATCTGTGCTAGTTGTGCAACAATATGGGTATGGAGGAATGGTTTTGCGAAATCAACACAACCACTTGACAACCAATAATGATGGTATTGAGTCACTTGTCGTCAAGAcagaataa 2109 0.3893 MNLNVILRVRKKTGSTAISGIIFPMAMGPALYALHRKFYKGNVELEESTLGAYVLWTLVLTVTGFPVLAHTLSELKLLYTGLGEAALTTAMLSDTYAWVLFTLFVPFSINGKGAIYSVVSTIVFIFICIFVVRPIIVKVIDRKTENDEWDDNKLLFVVMGLLICSQITDVLGTHAVVGAFVYGLILPHGKFADMVVSASDDFAGGFLAPLFFSGTGMRLTVRQIFEQPNWPLTLMIILLLCSIKILSTLLATFFFGMRSRDGFALGLLLNTKGVIAFIMLNIAWDRSILAGPTYTVLTSGVLLMTILVPPIVNAIYKPRKRFERNKLKTMQKLRLDVELRILACVHNTRHATGIISLIESFNATRLSPIHVFSLYLVELTGRAGALVAAHMEKPSGQLGAQNLTRSQEELESINSIFGALEEKYDAIRVETLNVVSSYATIHEDIYNSANDKRTSLIILPFHKQVSSEGALETTSIAYKDINVNVMQSAPCSVGIFVDRDLGLLSKLKFCIRMIFIGGPDDREALAVAWRMAGHPGARLSVVRMLLFDEAAEVDTSSHNEAQGILSVVMDNDMQNDLDDEYLNSFRLTAVNNNDSISYSEVDVHSGDDIPIVLNELENLGCDLYIVGQGNRRSSQVFSNLLEWCDCSELGVIGDMLASNNFGSQSSVLVVQQYGYGGMVLRNQHNHLTTNNDGIESLVVKTE 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00734 702 Pfam Sodium/hydrogen exchanger family 1 312 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu05g00734 702 PANTHER CATION/H+ EXCHANGER 3 1 687 - -
Tsu05g00734 702 PANTHER CATION/H + ANTIPORTER 1 687 - -
Tsu05g00734 702 Gene3D - 1 326 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00734 Tsu-Chr5 6168695 6184618 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00734 1 673 Antiporter Super Family AT2G13620 38.192 7.02e-161 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00734 - - gmx:100800072 1030.78