Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00733 ATGGGTGGTAGTGGTGTGATTCCAGCATGTTATGAAGTATATGTTCGTGATTCAAGTCGAATATGGCAAACTGATAATATCTTAAACAACGAGCTTCCCATTATTGCCACTCAAATTGTCTTTATTGTAGCTTTGTCACgtctttttttcttcatctaTAAACCCCTTCATCAACATCGTCTCATTTCACAAATCTCTGTTGGTTTTCTACTGACTCCACCATTACTTGGGAGATTCACGCCTATTTTCACATTCATTAATCCTGTAAATGGGGTGATTAATGCTGAAGTTCTAGCACATGTTGGTCTTATATACACTGCATTCCTCAGTGGTTTGGAGATAAACTTGAATACCATATTACATGTTAAAAAGAAAGCTGCAATCATTGCAGTTTCCGGGATCATCTTTCCAATATTGATGGGACCTGTTTTATATACTCTACATCGAAAAGTTTATGTCAACAGTCATGAATATCAACTTGAAGAAAGTAAAATGAATGCTTACGTACTATGGACTTTAGTTCTAACTGTGACAGGTTTTCCAGTTGTAGTTCACTCCCTTTCTGAGCTCAAACTTCTTTATACTAGTCTTGGCAAGGTTGCATTAACAGCTACTATGATCAGTGACACATATGCTTGgattttatttacattatttattcCTTTTTCAATTAATGGTCCAAAAGCAATATACTCGGTGGTAAGCACCATAATATTTGTTTTCATATGCATCTTTGTGTTGCGTCCTATCATTATAAAAGTCATTGATCGCAAGATAGAAAGAGATGAATGGGATGAAAGTCAATTACTCTTTGTAATTATGGGTGTTTTGGTTTGCTCGCACATAACAGATGTTCTTGGCACACATAGCATTGTTGGAGCTTTTGTGTTTGGGTTGATTTTACCTCACGGTAAATTTGCTGACATGGTAGTTTCAATGACCGATGATTTCGGTGGCGCATTTCTAGCACCATTATTCTTTACTGGCAATGGAATGCGACTCATGGTTAAATCCATTTTCTACCAGCAAAATTGGCCTTTGACAGTTATGGTTATAGTCCTATTGTGTGTTCCAAAGATATTAAGCACTTTGTTGGCCACCTTCTTTTTTGGTATGCCTGCCCGTGACGGTTTTGCTCTAGGAGTAATTCTTAATACAAAGGGCATGGTTGCATTGATAATGCTTAACATCGCTTGGGATAGATCGATTCTTTCAGTACCAACCTATGCAGTTTTAAACTCTGGAGTCCTTTTAATGACTATAGTGGTGTCTCCCCTTATCAACGCCATTTACAAGCCCAGAATGCGATTTGAGCAAAACAAGCTAAAGACTATACAAATGCTAAGACTTGACGCAGAGCTCAGGATTTTAGCATGTGTTCACAATACTCGCCAAACTAAAGGGATTATCAGCCTCATTGAATCTTTCAATGCCACTAGACTTTCTCCTATACATGTTTTTGCACTTTACCTTGTTGAGCTCACAAGACGTGCTGAAGCACTTGTTGCTGCTCATATGGAGAAGCCTGGTAGCCAACGTATAGAACAAAATCTTACAAGATCCCAAGAAGAGCTAGAATGCATTAACGATACCTTTGAAGCATTTGGAGAGGCATATGATGCTGTTAGAGTGCAAACCTTAAATGTTGTGTCAGCCTATGCAACCATTCACGAGGACATAAACAACTCAGCAAATGAAAAACGGACAAGCTTGATTATCCTTCCATTCCACAAACAACTAAGTTCAGGAGGTTCACTCGAAACAAGCAATATTGCGTACGAAGATATAAACTTGAATGTGATGCAAAGTGCACCTTGCTCTGTGGGAATATTTGTTGATCGTGGTCTTgggtcattatcaaaaatgaacTTTCACATACATATGATCTTTGTCGGAGGTCCTGACGATCGTGAAGCCTTAGCAATTGCATGGAGGATGGTAGGGCACCTAAGAATCCGATTATCAGTGATTCGAATGCTCTTGTTTGATGAAGCTGCAGAAGTAGACACCTCAAGTCATGTTGAAGCACAAGGCATACTATCTGTTGTAATGGATAATGAGAAGCAGAAGGAGTTAGATGATGCGTATGTGAATTCATTTAGACTAACAGTAGTGAACAACAATGATTATGTATCTTATTCAGAGGTTGATGTCCATTCAAGTGAAGATATTCCCACAGTCCTCAACGAGCTAGAGAAAATTGGTTGCGATTTATATATAATTGGACAAGGAAATCATAGGAACTCTCGGGTCTTTTCAAATTTATCGGAATGGTGTGATTGTTTAGAACTTGGAATTATAGGGGATATGTTGGCATCAGACAATTTTAGTTCGCGCTCATCTATTCTAGTTGTGCAACAATATGGGTATGGAGGAATGGTTTTGGGAAAGAAATCCAACCATGTGACCACTAATAGCAATGGTTTTGAGGCAGTTGTCGTGAAGACAGAATAA 2454 0.3778 MGGSGVIPACYEVYVRDSSRIWQTDNILNNELPIIATQIVFIVALSRLFFFIYKPLHQHRLISQISVGFLLTPPLLGRFTPIFTFINPVNGVINAEVLAHVGLIYTAFLSGLEINLNTILHVKKKAAIIAVSGIIFPILMGPVLYTLHRKVYVNSHEYQLEESKMNAYVLWTLVLTVTGFPVVVHSLSELKLLYTSLGKVALTATMISDTYAWILFTLFIPFSINGPKAIYSVVSTIIFVFICIFVLRPIIIKVIDRKIERDEWDESQLLFVIMGVLVCSHITDVLGTHSIVGAFVFGLILPHGKFADMVVSMTDDFGGAFLAPLFFTGNGMRLMVKSIFYQQNWPLTVMVIVLLCVPKILSTLLATFFFGMPARDGFALGVILNTKGMVALIMLNIAWDRSILSVPTYAVLNSGVLLMTIVVSPLINAIYKPRMRFEQNKLKTIQMLRLDAELRILACVHNTRQTKGIISLIESFNATRLSPIHVFALYLVELTRRAEALVAAHMEKPGSQRIEQNLTRSQEELECINDTFEAFGEAYDAVRVQTLNVVSAYATIHEDINNSANEKRTSLIILPFHKQLSSGGSLETSNIAYEDINLNVMQSAPCSVGIFVDRGLGSLSKMNFHIHMIFVGGPDDREALAIAWRMVGHLRIRLSVIRMLLFDEAAEVDTSSHVEAQGILSVVMDNEKQKELDDAYVNSFRLTVVNNNDYVSYSEVDVHSSEDIPTVLNELEKIGCDLYIIGQGNHRNSRVFSNLSEWCDCLELGIIGDMLASDNFSSRSSILVVQQYGYGGMVLGKKSNHVTTNSNGFEAVVVKTE 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00733 817 PANTHER CATION/H+ EXCHANGER 3 8 802 - -
Tsu05g00733 817 PANTHER CATION/H + ANTIPORTER 8 802 - -
Tsu05g00733 817 Pfam Sodium/hydrogen exchanger family 41 426 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu05g00733 817 Coils Coil 511 531 - -
Tsu05g00733 817 Gene3D - 35 440 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00733 Tsu-Chr5 6163126 6165769 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00733 10 788 Antiporter Super Family AT2G13620 37.295 2.53e-178 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00733 - - gmx:100804266 1222.61