Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00730 ATGTCTACGCCTGATAACACCACACCTGACAATAGTACCCCTGATAACTCCACACCTGACAATAGTACACCTGACAATAGTACCCCTGATGACGCCGATAACTCTGATTCACAGCCATCACAACCACCGCCTTCAGAATCACCTCCAGAATCACCTCCAGAATCTCCACCTGCAGAGCCACCGCCACAATCACCACCACCATCGCCGCCTTCAGATCCCCCACCGTCTCCTTCACAATCACCGCCTTCAGAATCACAACCTTCTCCTCCACCACCTACATCAAACAATCCGTCCCCACCATCACCCAATGGAGCGGTTCGTCCTCCACCGACCTCCACTGGGTCCGGCAATTCACCATCACCTCCACACAAATCATTACCAAGGTCACCAACCGAAAACTCGAATGGTAATTACGGAAACTCAaactccaacaacaacaacaacaacagcaatgATAATACCAATAAGGCAATAATTGGAGCAGCGCTTGGGGTGGGGTCTGTTCTTCTCATTTTGGTTGTTGTCTGCCTTGTTTGCTctaggaagaagaaaagaaagcaaATGTACTATTATGGAGATCACCCATCTCATGCACAAGGGAATAATAACTATTACAACAGTGGGCAGCACCCAAACCCAAATTACTACGGAGGTCCACCTGGGGATCATGTTGTTAGGGTACAAAGTGGAATGGCTCCTAGTGGAATGGCTCCTAATGGTGGTGGTGGAATGGCTCCTAGTGGAATGGCTCCTAATGGTGGTGGTGGAATGGGTCCTAGTGGAATGGGTCCTAATAGTGGTTGGGGTGCACAACCACAACCACCTAACCTAACGAACAGTGCAGACATGAGCTCGAATTACTCAACCGGACCACCGGCTTTGCCTCCTCCTTCACCAAGCCTTGCTTTAGGGCTTAAAGGAGGCACATTCACTTATGAGGAATTGGCAGCTGCAACCAATGGATTCATTGATTCAAATATGATAGGACAAGGTGGTTTTGGTTATGTCCATAAGGGTGTATTACCTAGTGGAAAGGAAATAGCTGTCAAGAGTTTAAAATCAGGTAGCGGACAAGGAGAACGGGAATTCCAAGCTGAGATTGACATCATTAGTCGGGTTCATCATCGTCATCTTGTTTCACTTGTTGGATACTGTATATCTGGTGGCCAAAGAATGTTGGTCTATGAATTTATTCCAAATAACACTATGGAATATCATCTTCATGGAAAGGGTCGACCTACTATGGATTGGCCAACTAGAATGAGGATTGCAATAGGTTCTGCTAAAGGGCTTGCTTATCTTCATGAAGATTGTCATCCTCGCATCATCCACCGTGATATCAAAGCTGCAAATGTCCTTATTGATGACAGCTTTGAAGCAAAGGTTGCTGATTTTGGATTGGCTAAGTTGACAACAGATAATAATACTCATGTATCAACTCGTGTCATGGGAACATTCGGGTACCTAGCTCCTGAATATGCATCCAGTGGAAAATTGACAGAGAAGTCTGATGTTTTCTCATTTGGGGTCATGCTATTGGAACTTGTAACTGGGAAGCGACCTGTGGATCCTTCAATTACCATGGATGACAGCTTAGTGGACTGGGCTCGACCACTATTGACTCGTGGACTAGAGGACCCCGATGGAAACTTTGGTGAGTTGGTGGATCCATTTTTGGAAGGAAATTACAATCCTCAAGAACTCGCTAGAATGGCAGCTTGTGCAGCTGCTAGCATTCGTCACTCTGCCAAGAAGCGTCCTAAAATGAGCCAGATTGTAAGAACATTGGAAGGAGATGTCTCATTGGATGACTTGAAGGACGGAATTAAGCCAGCGCACAGCACTGTTTATACCTCTTCATCAGGTAGCTCAGAGTATGACACAATGCAGTACAACGCTGATATGCAGAAGTTCAGAAAGGCGGTGTTTAACAGTGACACCAGCAGTTTCTCCAGTGGTGATATGACCCAAACACCAAAGGCAAGGCCGCCACAACCATTGCTTTAA 2007 0.4509 MSTPDNTTPDNSTPDNSTPDNSTPDNSTPDDADNSDSQPSQPPPSESPPESPPESPPAEPPPQSPPPSPPSDPPPSPSQSPPSESQPSPPPPTSNNPSPPSPNGAVRPPPTSTGSGNSPSPPHKSLPRSPTENSNGNYGNSNSNNNNNNSNDNTNKAIIGAALGVGSVLLILVVVCLVCSRKKKRKQMYYYGDHPSHAQGNNNYYNSGQHPNPNYYGGPPGDHVVRVQSGMAPSGMAPNGGGGMAPSGMAPNGGGGMGPSGMGPNSGWGAQPQPPNLTNSADMSSNYSTGPPALPPPSPSLALGLKGGTFTYEELAAATNGFIDSNMIGQGGFGYVHKGVLPSGKEIAVKSLKSGSGQGEREFQAEIDIISRVHHRHLVSLVGYCISGGQRMLVYEFIPNNTMEYHLHGKGRPTMDWPTRMRIAIGSAKGLAYLHEDCHPRIIHRDIKAANVLIDDSFEAKVADFGLAKLTTDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELVTGKRPVDPSITMDDSLVDWARPLLTRGLEDPDGNFGELVDPFLEGNYNPQELARMAACAAASIRHSAKKRPKMSQIVRTLEGDVSLDDLKDGIKPAHSTVYTSSSGSSEYDTMQYNADMQKFRKAVFNSDTSSFSSGDMTQTPKARPPQPLL 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00730 668 Gene3D Transferase(Phosphotransferase) domain 1 398 608 - -
Tsu05g00730 668 MobiDBLite consensus disorder prediction 1 150 - -
Tsu05g00730 668 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 64 647 - -
Tsu05g00730 668 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Tsu05g00730 668 MobiDBLite consensus disorder prediction 1 40 - -
Tsu05g00730 668 MobiDBLite consensus disorder prediction 200 299 - -
Tsu05g00730 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Tsu05g00730 668 MobiDBLite consensus disorder prediction 41 107 - -
Tsu05g00730 668 SUPERFAMILY Protein kinase-like (PK-like) 304 596 IPR011009 -
Tsu05g00730 668 MobiDBLite consensus disorder prediction 648 668 - -
Tsu05g00730 668 Gene3D Phosphorylase Kinase; domain 1 302 397 - -
Tsu05g00730 668 SMART serkin_6 322 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00730 668 MobiDBLite consensus disorder prediction 266 289 - -
Tsu05g00730 668 PANTHER RECEPTOR-LIKE KINASE 64 647 - -
Tsu05g00730 668 MobiDBLite consensus disorder prediction 108 150 - -
Tsu05g00730 668 Pfam Protein tyrosine and serine/threonine kinase 326 523 IPR001245 GO:0004672|GO:0006468
Tsu05g00730 668 ProSiteProfiles Protein kinase domain profile. 322 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00730 Tsu-Chr5 6147971 6151187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00730 109 656 Trihelix Transcription Factor Family AT1G70460 47.237 1.96e-157 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Tsu05g00730 PK_Tyr_Ser-Thr 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00730 - - gmx:100777163 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00730 05 6147971 6151187 Tsu04g03378 04 42950694 42954455 ECH
Tsu05g00730 05 6147971 6151187 Tsu05g00730 05 6147971 6151187 ECH
Tsu05g00730 05 6147971 6151187 Tsu04g03378 04 42950694 42954455 PCT