Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00725 ATGAAACAAGCAGCTACAAAATCAACACTAAGAAGGCTATGTCCAAACATAGATAAAGAAGATGGATTGGAAACTGTTCTTGAAATTCCTATACCTGAAGAAATGTTTGCAAACATGGGAAGTAATGTGACAATAAGGTGGCAAAATATGTTAACATGGATGAAGGCTCAAACTGAGGATAAATTGTCTTCCCCGTCGGTTTCAGCGAGGTTAAATGAGCTTCGATTCTTGCTTTACCTTGTTGGTTCTCCTCTTATTCCTCTTCAAGTTCAATTAGGACATTCCATTCATCGTCCTGTCAGAGATTGTTCAATCGAAGCATCAACTGCCAAATATATAGTGCAACAATATATAGCAGCAACAGGAGGACAACCAGCATTGAATGCAGTAGAAAGTATGTGTGTAATGGGACAAATCAAGATTACTGCTTCAGATTTTCATCATATTAATGAAACTTGTGAGGTGAAAAAGACCTCTGAAGAAAATGGAGGATTTGTTTTATGGCAAAAGGACCCAGATTTGTGGTGTTTAGAACTTGTTGTGTCTGGTTGCAAGGTTTGTTGTGGTAGTAATGGTAAGGTTTCATGGCGTCATTCTTCTAATCAACAATCACCCATTGCAAGAGGCACTCCAAGACCTCTTCGTCGATTCCTTCAGGGATTGGATCCAAGGGCTACAGCAAACTTATTTTTAGATGCTGCATGTATAGGAGAGAAAATAATCAACGAAGAAGAATGTTTCATTCTAAAATTAGAAACAAGCCCAGCAATTCGTGAGGCCCAAAGTGGCCCAAATTTTGAAGTAATTCATCACACAATATGGGGGTATTTCAGTCAAAGATCAGGTCTCTTAGTACAATTTGAAGACTCAAGATTACTAACAATGAGAACAAAAGATGATAATGACATTTTTTGGGAAACAAGTTTAGAGTCAGTAATTGATGATTATAGGTATGTTGATGGAATTAATGTGTCACATAGTGGCACAACTCGTGTTACTGTTTCTAGATATGGTGAACAATCAGCAAATCATAAAAGGGAATTGGAAGAAAGATGGAAGATTGAAGAAGTAGATTTTAATATAAGGGGTTTGACTTCTGAAAGCTTTTTGCCTCCATCAAACTTaggaaaaacataa 1137 0.3676 MKQAATKSTLRRLCPNIDKEDGLETVLEIPIPEEMFANMGSNVTIRWQNMLTWMKAQTEDKLSSPSVSARLNELRFLLYLVGSPLIPLQVQLGHSIHRPVRDCSIEASTAKYIVQQYIAATGGQPALNAVESMCVMGQIKITASDFHHINETCEVKKTSEENGGFVLWQKDPDLWCLELVVSGCKVCCGSNGKVSWRHSSNQQSPIARGTPRPLRRFLQGLDPRATANLFLDAACIGEKIINEEECFILKLETSPAIREAQSGPNFEVIHHTIWGYFSQRSGLLVQFEDSRLLTMRTKDDNDIFWETSLESVIDDYRYVDGINVSHSGTTRVTVSRYGEQSANHKRELEERWKIEEVDFNIRGLTSESFLPPSNLGKT 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00725 378 Pfam Protein of unknown function (DUF620) 133 372 IPR006873 -
Tsu05g00725 378 PANTHER BNAC02G43970D PROTEIN 10 367 - -
Tsu05g00725 378 PANTHER LIPASE 10 367 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00725 Tsu-Chr5 6127514 6129764 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00725 - - adu:107487809 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00725 05 6127514 6129764 Tsu05g00725 05 6127514 6129764 ECH
Tsu02g02414 02 24630409 24633823 Tsu05g00725 05 6127514 6129764 ECH