Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00719 ATGGTTCACACTTTCAGGTATGACGATCGTCCTGTTGCTATTAAGATTTTAATCCCAGAAAGCACATCGGAAGCTACACCAGAATGTAAGGCAAATTTTCAGAGGGAGGTTAACCTGTTATCTAAAATGGAACATAACAATATTATCAAGTTTGTTGCAGCCTCTGTGGAACCAACAATGATATTAGTCACTGAACTAATGGAAGGTGGTTCACTTCAGAAACATTTGAAGAACATGTATCCAATAACTTTTTGTTTGGAACAATGTTTAAGCTATGCTCTTGAAATTTCACAAGCTATGGAATATTTGCATGCAAATGGCATCATTCACCGTGACCTCAAGCCTGGTAATTTACTGCTTACAAAAGACCATAATCATGTTAAACTTGCTGATTTTGGGGTTGCTAGAGATTTTGGTGATGAGATGACTTGTGAAGCTGGTACTTATCGATATATGGCTCCTGAGGTAATGAGCAAAGATCCACTTCCAAAAGGAGCAAAGAAAAGCTATGATCATAAGGCAGATGTGTTTAGTTTTGCACTAACTCTTTGGTCTTTAATCACAAACCAAATTCCTTTCAAAGATCGGATAGACTTAATGGCTGCTTATGCTACTAAAAACAATATAAGACCAAGTTTAGATGAGCTTCCTGAAGAGATAGTTCCTCTGCTGCAATCCTGCTGGATGGAAGATCCAAAACTCCGACCGGAGTTTAAGGAAATCACTGAAACACTGATAAGGATTCTCCAAAACATTTACACAAAAAAGATTAATGATCTTGCTAGCATTAAAGAAACTGCCAAAAGTGAAGCACAAACCTCAAGGGAAAACGAAAACATGACTATGGAATCTGAGACTATGGATGAAAAGAAACCTAAAAAGAAATGTAAAATCAAACGCTTTTTTGCATATTTCCGAAGTTGTATTGCTTTTTAG 936 0.3675 MVHTFRYDDRPVAIKILIPESTSEATPECKANFQREVNLLSKMEHNNIIKFVAASVEPTMILVTELMEGGSLQKHLKNMYPITFCLEQCLSYALEISQAMEYLHANGIIHRDLKPGNLLLTKDHNHVKLADFGVARDFGDEMTCEAGTYRYMAPEVMSKDPLPKGAKKSYDHKADVFSFALTLWSLITNQIPFKDRIDLMAAYATKNNIRPSLDELPEEIVPLLQSCWMEDPKLRPEFKEITETLIRILQNIYTKKINDLASIKETAKSEAQTSRENENMTMESETMDEKKPKKKCKIKRFFAYFRSCIAF 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00719 311 PIRSF TyrPK_CSF1-R 36 304 - -
Tsu05g00719 311 PIRSF TyrPK_CSF1-R 10 80 - -
Tsu05g00719 311 ProSiteProfiles Protein kinase domain profile. 1 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00719 311 SUPERFAMILY Protein kinase-like (PK-like) 5 264 IPR011009 -
Tsu05g00719 311 CDD STKc_MAP3K-like 6 245 - -
Tsu05g00719 311 Gene3D Transferase(Phosphotransferase) domain 1 2 288 - -
Tsu05g00719 311 PRINTS Tyrosine kinase catalytic domain signature 64 77 IPR001245 GO:0004672|GO:0006468
Tsu05g00719 311 PRINTS Tyrosine kinase catalytic domain signature 102 120 IPR001245 GO:0004672|GO:0006468
Tsu05g00719 311 PRINTS Tyrosine kinase catalytic domain signature 174 196 IPR001245 GO:0004672|GO:0006468
Tsu05g00719 311 PRINTS Tyrosine kinase catalytic domain signature 216 238 IPR001245 GO:0004672|GO:0006468
Tsu05g00719 311 PANTHER PROTEIN KINASE ATN1-LIKE PROTEIN-RELATED 2 286 - -
Tsu05g00719 311 Pfam Protein kinase domain 8 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00719 311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 108 120 IPR008271 GO:0004672|GO:0006468
Tsu05g00719 311 MobiDBLite consensus disorder prediction 268 289 - -
Tsu05g00719 311 SMART serkin_6 2 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00719 311 PANTHER SERINE-THREONINE PROTEIN KINASE 2 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00719 Tsu-Chr5 6081744 6084014 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00719 11 286 MAP Kinase Kinase Kinase AT5G66710 48.736 2.35e-92 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Tsu05g00719 Pkinase 4.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00719 - K04427 gmx:106796450 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00719 05 6081744 6084014 Tsu05g00719 05 6081744 6084014 ECH