Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00711 ATGACCGGCGGCGGATCGTCGGGAAGATTACCGACatggaaagagagagaaaacaataagagaagagaaagaagacgAAGAGCTATTGCTGCTAAGATCTATTCAGGTCTTCGTTCTCAAGGTAACTTTAAGCTTCCTAAACACTGTGATAACAACGAAGTGTTGAAAGCTCTTTGTTCTGAAGCTGGTTGGATCGTTGAAGAAGATGGAACTACTTATAGAAAGGGAAGTAAGAGACCACTACCGAATGAGATGGGAGGAACTCCACCAAATATGAGTGCTTGTTCTTCACTTCAACCAAGTCCACAATCTTCATCATTTCCAAGTCCGCAATCCTCGTCATTCCCGAGTCCAATACCGTCCTACCATGCGAGTCCAACTTCATCGTCTTTCCCAAGTCCTTCTCGCATGGATGGAATTTCAAACACTTCTTCCTTTCTTCTACCGTTCATCAGAAACATAACTTCAATCCCCACAAATCTCCCACCACTTAGGATTTCTAATAGTGCTCCTGTTACACCACCTCTTTCTTCTCCAAGAAGTTCAAAGCGAAAAGCAGATTTTGAATCCCTCTCTAATGGTTCTTTTAACTCGTCATTTCGCCACCCACTTTTTGCTACCTCTGCACCGTCAAGTCCCACACGCCGTAACCACTTACCCCCTTCCACCATTCCAGAGTGCGATGAGTCAGATGCTTCTACGGTGGATTCTGGTCGATGGGTTAGTTTTCAGACAACAGGTGCCCATGGTGCGGCTCCTCCTTCCCCTACCTTTAATCTCATGAAACCAGTAATGCAGAAGATCACTCCTCAGAGTTCGATGGATATGATTCATATGAATGAAGCCATGCAATGGAGTTCAGGTTCAGCTGCTGAGAGAGGAAGAGGCTCAGATTTTGACTTTGAGAATGGCAGAGTGGTGAAACCATGGGAAGGTGAGAGAATTCACGAAGTAGGAGTGGATGAATTGGAGCTTACTCTGGGATTTGGTAAGGCCTGA 999 0.4374 MTGGGSSGRLPTWKERENNKRRERRRRAIAAKIYSGLRSQGNFKLPKHCDNNEVLKALCSEAGWIVEEDGTTYRKGSKRPLPNEMGGTPPNMSACSSLQPSPQSSSFPSPQSSSFPSPIPSYHASPTSSSFPSPSRMDGISNTSSFLLPFIRNITSIPTNLPPLRISNSAPVTPPLSSPRSSKRKADFESLSNGSFNSSFRHPLFATSAPSSPTRRNHLPPSTIPECDESDASTVDSGRWVSFQTTGAHGAAPPSPTFNLMKPVMQKITPQSSMDMIHMNEAMQWSSGSAAERGRGSDFDFENGRVVKPWEGERIHEVGVDELELTLGFGKA 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00711 332 MobiDBLite consensus disorder prediction 1 25 - -
Tsu05g00711 332 MobiDBLite consensus disorder prediction 73 137 - -
Tsu05g00711 332 MobiDBLite consensus disorder prediction 202 233 - -
Tsu05g00711 332 MobiDBLite consensus disorder prediction 160 180 - -
Tsu05g00711 332 Pfam BES1/BZR1 plant transcription factor, N-terminal 6 144 IPR008540 -
Tsu05g00711 332 MobiDBLite consensus disorder prediction 160 190 - -
Tsu05g00711 332 PANTHER BES1/BZR1 HOMOLOG PROTEIN 1 1 331 - -
Tsu05g00711 332 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 331 IPR033264 GO:0003700|GO:0006351|GO:0009742
Tsu05g00711 332 MobiDBLite consensus disorder prediction 202 219 - -
Tsu05g00711 332 MobiDBLite consensus disorder prediction 89 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00711 Tsu-Chr5 6001092 6003718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00711 9 332 BZR Transcription Factor Family AT1G75080 56.509 1.70e-96 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Tsu05g00711 BES1_N 3.4e-58 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00711 K14503 - gmx:100795837 426.402