Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00699 ATGAGTCCTTTATCCATTGCAAAAGCCAGTAAcatagaagatgaagataaaaAGCTGATTCATGGCCAAGTCTTACTAGTACCTGTAACTTGCGGTTGCGCTAGAAATCGCTATTTCTCAAATTTCACTTATACAATCAAGCTAGGTGACAACTACTTCATAGTTTCAACCACTCAATACCAGAATCTCACCAATTATAAGGAAATGGAAGATTTCAACCCAAATCTAAGTCCAAATCTATTGCCACAAGATATCAAAGTTGTAGTACCTTTATTCTGCAAGTGCCCTTCAAAGAATCAGTTGAGCAAAGGAATAAAGTATCTGATTACTTATGTGTGGCAAGCTAATGATAATATTACCCTTGTAAGTTCGAAGTTTGGTGCATCACAAGCGGACATGTTTTCCGAGAACAGTCAAAAGTTCACTGCTGAAACCAATGTTCCAATTTTGATCCCAGTGACAAAGTTACCGGAACTCGATCAACCATCTTCAAATGGAAGTAAAAACAGCATTCAAAAGATTCCTGTTATAATTGGTATTAGCTTAGGAAGTGTTCTTTTCATTGTAGTTTTAACACTATCACTTGTGTATGTATATTGTCTCAGAATGAAGAGATTGAATAGGACTGCTTCATTGGCCGAGACTGCGGATAAGTTACTTTCAGGTGTTTCAGGTTATGTAAGCAAGCCAACAATGTATGAAATGGATGTGATCATGGAAGCTACAATGAACCTGAGTGAGAATTGTAAGATCGGTGAAACAGTCTACAAGGCTAATATAGATGGTAGAGTTTTAGCAGTGAAAAACATCAAGAAAGATGCTTCTGAGGAGCTGAAAATTCTGCAGAAGGTAAATCATGGAAATCTTGTGAAACTAATGGGTGTGTCTTCTGACAATGATGGAAACTGTTTCCTTGTTTATGAGTATGCTCAAAATGGATCACTTGATGAGTGGCTGTTCTCCGAATCTTCAAAAGCTTCGAATTCGGTCGTCTCGCTTACATGGTCTCAGAGAATAACCATAGCAATGGATGTTGCAGTGGGTCTGCAATACATGCATGAACATACTTTTCCAAGAATAATCCACAGAGACATCACAACAAGTAATATCCTTCTTGACTCAAATTTTAAGGCCAAGATAGCAAATTTTTCAATGGCTAGAACTTCCACAAACAACATGATGCCGAAAATAGATGTTTTCGCTTTCGGGGTTGTTCTGATAGAGTTGCTTACCGGAAAGAAAGCGGTAACAACGAAAGAAAACGGGGAGGTTGTTATCTTGTGGAAGGATTTCTGGAAGATTTTTGATATAGAAGGGAATAGAGAAGAAAGACTAAGAAAATGGATGGATCCTAAGTTAGAGAACTTTTATCCTATTGATCATGCCCTAAGTTTGGCTTCTTTGGCAGTGAATTGTACTGCAGATAAATCATTGTCAAGACCAAGCATTGCAGAAATTGTTCTTTGTCTTTCTCTTCTCAATCAACCATCATCTGAACCAATGTTGGAAAGATCTTTGACATCTGGTTTAGATGTTGAAGCTACTCATGTTGTTACTTCTATCGCAGCTCGTTGA 1575 0.374 MSPLSIAKASNIEDEDKKLIHGQVLLVPVTCGCARNRYFSNFTYTIKLGDNYFIVSTTQYQNLTNYKEMEDFNPNLSPNLLPQDIKVVVPLFCKCPSKNQLSKGIKYLITYVWQANDNITLVSSKFGASQADMFSENSQKFTAETNVPILIPVTKLPELDQPSSNGSKNSIQKIPVIIGISLGSVLFIVVLTLSLVYVYCLRMKRLNRTASLAETADKLLSGVSGYVSKPTMYEMDVIMEATMNLSENCKIGETVYKANIDGRVLAVKNIKKDASEELKILQKVNHGNLVKLMGVSSDNDGNCFLVYEYAQNGSLDEWLFSESSKASNSVVSLTWSQRITIAMDVAVGLQYMHEHTFPRIIHRDITTSNILLDSNFKAKIANFSMARTSTNNMMPKIDVFAFGVVLIELLTGKKAVTTKENGEVVILWKDFWKIFDIEGNREERLRKWMDPKLENFYPIDHALSLASLAVNCTADKSLSRPSIAEIVLCLSLLNQPSSEPMLERSLTSGLDVEATHVVTSIAAR 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00699 524 SUPERFAMILY Protein kinase-like (PK-like) 230 492 IPR011009 -
Tsu05g00699 524 ProSiteProfiles Protein kinase domain profile. 213 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00699 524 Pfam Protein tyrosine and serine/threonine kinase 271 391 IPR001245 GO:0004672|GO:0006468
Tsu05g00699 524 Gene3D Transferase(Phosphotransferase) domain 1 392 507 - -
Tsu05g00699 524 Gene3D Phosphorylase Kinase; domain 1 221 309 - -
Tsu05g00699 524 PANTHER SERINE/THREONINE RECEPTOR-LIKE KINASE NFP 2 524 - -
Tsu05g00699 524 Gene3D Transferase(Phosphotransferase) domain 1 310 391 - -
Tsu05g00699 524 ProSitePatterns Tyrosine protein kinases specific active-site signature. 360 372 IPR008266 GO:0004672|GO:0006468
Tsu05g00699 524 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 2 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00699 Tsu-Chr5 5878058 5879632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00699 10 493 Receptor kinase-like Gene Family AT3G21630 31.970 9.77e-69 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tsu05g00699 PK_Tyr_Ser-Thr 3.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00699 - - cam:101515074 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00699 05 5878058 5879632 Tsu05g00699 05 5878058 5879632 ECH