Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00695 ATGGAAGCTCAAATTTCCTTTATTCTTATTCCCTTCtctatttttatacttttgcaTTGGCTTGcaacaaaatattacaagtcaAAAACCATTGCTTACAAATTGCCACCTGGTCCAAAAAAATTACCTCTCATTGGAAACTTGCATCAACTAGCATTATTAGGAAATCTTCCACATCATAGTTTCAAAAAACTATCTCAAAAACATGGACCTTTAATGCACCTAAAGCTTGGTGAAAATAATGTAGTGGTTGTTTCTTGCTCAAACTTAGCCAAAGAAGTAATGAAAACACATGATGTTGTTTTTGCTAATAGGCCACACATTGTATCTTCTGAAATTCTATGCTATGGATCCAAAGATATTCTATTTTCCCCACATGGTGATTATTGGagacaaatgagaaaaatatgtGTCACTGAGATTCTAAGTGCCAAAAGGGTTCAATCTTTTTCTTACATTAGAGAAGATGAGACACACAAATTTATACAAACAATTATTAAGTCATTTGCAGGCTCAAAAATCAACCTCACTACTAGAATTTTTTCGTTGATAAATTCTATTATTTCGAGAGCGGCGTTTGGTGATAAAGCAGAGGATCAAGATGAATTTGTGTCTTTGATTAGAAAAGCAGTAGAGCTTTCAAGTGGACTTGATCTTGATGATTTGTTTCCTTCGATGAAAGTCATTCATAAACTAACGGGGTTGAGAtcaaaaattgagaaaattcaCAAAAGGGTAGACAAAATATTAGATAATGTTGTGAGAAAACATCAAGAAAAGAGAGCAACAGTTAGTCAAGGTAACAATTGTGAAATTGACAAGGAAGATCTTATGGATGTTCTTTTGAGGGTCCAACAAAGTGGAAGCCTTGATATCCAATTGACAATCAATAGCATCAAAGCTGTGATTTGGGATGTATTTGTTGCTGGAACTGATACATCAGCAACAACAATAGGTTGGGCAATGTCAGAAATGATGAAAAATTCAAGAGTTAGAATAAAAGCACAAGCTGAATTAAGAGAAATGTTCAAAGGAAAGGAAGTAATATCTGAAACCGATACAGAGGAACTCCCTTACTTAAAGTTAGTGATCAAAGAAACATTGAGGTTACACCCACCTTCTCCTTTGTTAGTTCCAAGAGTAAACACTGAACTAGTCAAAATAGATGGATATGATATACCAAAAAAGACTACAGTCTTGATAAATGCGTGGGCAATAGGAAGAGATCCACAATATTGGAATGATGCTGAGATGTTCATTCCAGAGAGATTTGACGGTAGTTTAATTGATTTCAAAGGAAATAACTTCGAGTACACTCCTTTTGGAGCTGGAAGGAGAATGTGTCCAGGCATGCTATTTGGTTTAGCTAGTGTTATGTTTCCTCTAGCTCTATTGCTCTATCACTTTAATTGGGAACTCCCAAATAAGATGAAATCTGGGGATTTAGATATGACCGAAGATTTTGGATTAACAGTTGGAAGGAAAAATGATTTGTGTTTGATTCCAACTATTTATGATGCCTAA 1524 0.3346 MEAQISFILIPFSIFILLHWLATKYYKSKTIAYKLPPGPKKLPLIGNLHQLALLGNLPHHSFKKLSQKHGPLMHLKLGENNVVVVSCSNLAKEVMKTHDVVFANRPHIVSSEILCYGSKDILFSPHGDYWRQMRKICVTEILSAKRVQSFSYIREDETHKFIQTIIKSFAGSKINLTTRIFSLINSIISRAAFGDKAEDQDEFVSLIRKAVELSSGLDLDDLFPSMKVIHKLTGLRSKIEKIHKRVDKILDNVVRKHQEKRATVSQGNNCEIDKEDLMDVLLRVQQSGSLDIQLTINSIKAVIWDVFVAGTDTSATTIGWAMSEMMKNSRVRIKAQAELREMFKGKEVISETDTEELPYLKLVIKETLRLHPPSPLLVPRVNTELVKIDGYDIPKKTTVLINAWAIGRDPQYWNDAEMFIPERFDGSLIDFKGNNFEYTPFGAGRRMCPGMLFGLASVMFPLALLLYHFNWELPNKMKSGDLDMTEDFGLTVGRKNDLCLIPTIYDA 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00695 507 Pfam Cytochrome P450 36 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00695 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Tsu05g00695 507 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00695 507 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00695 507 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00695 507 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00695 507 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00695 507 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00695 507 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00695 507 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00695 507 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00695 507 SUPERFAMILY Cytochrome P450 36 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00695 507 Gene3D Cytochrome P450 22 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00695 507 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00695 507 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00695 507 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00695 507 PANTHER OS08G0105600 PROTEIN 3 507 - -
Tsu05g00695 507 PANTHER CYTOCHROME P450 71D8 3 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00695 Tsu-Chr5 5811749 5813596 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00695 14 505 Cytochrome P450 AT3G26300 43.400 3.35e-139 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00695 - - gmx:100783298 659.833