Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00674 atgtttctacATCAAAAGATGAACTTTTTAATCATGttcataattttcttattgAGCAAAACAAGAGCACAGAACAATAACACAATCTGTTTCAATCATTGTGGGGATCAAATTGTTGACTACCCTTTTGGATTCTCTGATGGTTGTGGAATCAAACTAAACTGTATTGATGATAAAGTCCAAATTGATGAGTTTCTGATTCAGAATATGACCAAAAACAGTATATTAATCTACCTTCCTGCAAAATGCAACCGTAGTATTCAATCTATTCAACCACTTTTCAGTGATAATTTTGCTCCAACAAGGAACAATAGTTTTCTAGTTCAAGATTGTTCAGCTCCTTTAGGTGGATGTGTGATTCCAGCTTCAAGTTTTGTTGGAAATCAGATTGAAGTTGAAAGCTGTGACAGAAAAAGTAGTAATATTAGTTGTTTTAATCAGCAATACCATGAGGGAGATGTTGATGTTTTGTCGTACGAGGAATTGAATAAAACTAGGTGTAACAATTTGTTCTCAGCTGTTGCTGTTGAACAAAGTAAAGAGATTTCGTTGCAGTTTCAAGCTATTGAATTGGCATGGTGGGTTAAAGGTTCTTGTCAATGTTCTAACAATGCTACTTGTTCAAATGTGACTCTACAAGGAAATGGTTCTGGATTTCGGTGTCAGTGTTTAGATGGTTTCCGGGGAGACGGATTTGCTAATGGCACAGGTTGCCGGAGAGCTCCAGGTTGCAGTGCTTCAACACTAACATCCGGTGGATGTGGGAGTGCAACTAAAATCGGTGTTGTTGTCGCAGTGAGCGTAACCGGAGTTGTGATCGTGGCTGCTCTCATTATTCTATGCTTCTGTGCCAGGCGACGTTTTACTTGGTTGAGAAAGCATACCAGAGTAAAGCGCCTACTACGTGAAGCTGCGGGAAACTCTATTGTGCCTCTATACTCTTACAAAGACATAGAAAGAGCCACAAATTCTTTCTCTGATAAACAGAGGTTGGGAACCGGGGCATTCGGTACAGTCTATTCCGGAAAACTTCACAATGATGAGTTTGTTGCAATAAAGAAGATAAGGCATAGAGATACAAACAGTGTTGATCAAGTCATGAATGAGATCAAGCTCCTTTCATCGGTGAGTCACCCAAATTTGGTTCGGCTCCTAGGTTGCTGCATTGAGGAGGGAGAGCAGATACTTGTTTATGAATATATGCCAAATGGAACGTTGTCTGAGCATTTGCAAAGAGAGAGAGGTAAAGGTCTTCCATGGACAATACGACTCACCATTGCTTCCGAAACCGCTAATGCTATAGCTTATCTCCATTCTTCAATTCATCCCCCAATTTACCACAGAGATATAAAATCCAGTAATATACTATTGGATTATAACTACAAATCTAAAGTAGCTGATTTTGGACTTTCTAGGCTTGGCATGATAGAAACATCACATATTTCAACTGCTCCACAGGGTACTCCAGGCTATGTCGATCCTCAATACCACCAGAACTTCCATCTTTCTGATAAAAGTGATGTATACAGCTTTGGAGTGGTTTTGGTAGAGATAATAACTGCCATGAAAGTGGTTGATTTTGCCAGACCTCAAAGTGAGGTTAATTTAGCTGCACTTGCTGTTGATAGGATTAGGAGGGGTTCTATAGATGAGATTGTCGATCCCTTCCTTGAACCAAATAGAGATGCCTGGACTCTATATTCCATTAATAAGGTGGCTGAGCTTGCATTTAGATGTCTTGCTTTTCATAGTGACATGAGGCCGACAATGATGGAAGTGGCAGAAGAGCTTGAGTACATCAGACGCCGTGCATGGGCAACTATGGAGGAAACCATATGTTTGGGTTCGTCGATTGGTTCTGCAAGTTCGTCGCCTCGCAATGGAAGTGAGAAGTCATTCAGTGGTCTTATGTTAAAGAAATTAGGGCAAGAGAGTGAGGAATTGATTGTTCCACCCAAGATTGAGAACTTGTTGCAATCTATGGAACTGGAGGTGAAGGACAACTCCCCTGTATCGGTGCATAATCCTTGGTCGAGTGGACCGAGCTCGCCTTCATCAAACAGCTTGTTGGGAAATGTTGTTCGGTGA 2088 0.4052 MFLHQKMNFLIMFIIFLLSKTRAQNNNTICFNHCGDQIVDYPFGFSDGCGIKLNCIDDKVQIDEFLIQNMTKNSILIYLPAKCNRSIQSIQPLFSDNFAPTRNNSFLVQDCSAPLGGCVIPASSFVGNQIEVESCDRKSSNISCFNQQYHEGDVDVLSYEELNKTRCNNLFSAVAVEQSKEISLQFQAIELAWWVKGSCQCSNNATCSNVTLQGNGSGFRCQCLDGFRGDGFANGTGCRRAPGCSASTLTSGGCGSATKIGVVVAVSVTGVVIVAALIILCFCARRRFTWLRKHTRVKRLLREAAGNSIVPLYSYKDIERATNSFSDKQRLGTGAFGTVYSGKLHNDEFVAIKKIRHRDTNSVDQVMNEIKLLSSVSHPNLVRLLGCCIEEGEQILVYEYMPNGTLSEHLQRERGKGLPWTIRLTIASETANAIAYLHSSIHPPIYHRDIKSSNILLDYNYKSKVADFGLSRLGMIETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFARPQSEVNLAALAVDRIRRGSIDEIVDPFLEPNRDAWTLYSINKVAELAFRCLAFHSDMRPTMMEVAEELEYIRRRAWATMEETICLGSSIGSASSSPRNGSEKSFSGLMLKKLGQESEELIVPPKIENLLQSMELEVKDNSPVSVHNPWSSGPSSPSSNSLLGNVVR 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00674 695 SMART serkin_6 325 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00674 695 Pfam Protein kinase domain 326 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00674 695 Gene3D Phosphorylase Kinase; domain 1 288 400 - -
Tsu05g00674 695 ProSiteProfiles Protein kinase domain profile. 325 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00674 695 ProSitePatterns Protein kinases ATP-binding region signature. 331 354 IPR017441 GO:0005524
Tsu05g00674 695 Gene3D Laminin 199 234 - -
Tsu05g00674 695 ProSiteProfiles EGF-like domain profile. 195 233 IPR000742 -
Tsu05g00674 695 SUPERFAMILY Protein kinase-like (PK-like) 307 599 IPR011009 -
Tsu05g00674 695 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 22 670 IPR045274 GO:0007166
Tsu05g00674 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Tsu05g00674 695 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 22 670 - -
Tsu05g00674 695 MobiDBLite consensus disorder prediction 669 695 - -
Tsu05g00674 695 Gene3D Transferase(Phosphotransferase) domain 1 401 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00674 Tsu-Chr5 5639475 5643817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00674 1 695 Receptor kinase-like Gene Family AT2G23450 55.289 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Tsu05g00674 Pkinase 3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00674 - - gmx:100779130 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00674 05 5639475 5643817 Tsu04g03330 04 42410347 42415373 PCT