Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00671 ATGGCTGACTCCACTCCAACTGCATCTACTTCTAATGCCACCACCACATATTCTTGTTTCCAACGAACGGTTACTCTTTACGATTGGTGGCTCGTTAAATCTCAAAACGACATCCAAGGAAACTGTTTTGCCATCTCTGGCGTCTCTTCCAGAAAGGAAGAAGCAGTTCGTGTGTTCAATTCTGCTCCTATTATCAAAAGATATGATGAGTTTTCCCTTGAGACTGCCGATGGTATATATGTTGTCATTAGGGGTTTCATCAACAAGCAACGCACGCTGGATAATGGTTTTACTTCCGAGATTTTCAAGAGTTTTTTATTTGGCTTTCCTCAAAACTGGGAGAGTTGTGCTCTAGGTTGTTTCAGAGAAGAAGCAGAAGCTGGTGCTTATTCGGTCAATGTTATGGATAATGTATCTGCAGTTTTTGAAGAAATCTCGGCTGACGGTGAGGAAAAATCCATTCCTACTTCGCCGATGTTGCCTGAAGAGACCCCAGAAAAGGGGATGAGTGGATTAGATGTTTGTGGCAGGGGTGGAAATAAACGTCGTAGCAGGTTGCATAATATTAATGTGTGTCAGCGGAAGAAGCAGCATGCATCTAGAAGTCCTCTCAAGTGTCCCGATGAAGAGCTGAGCTATACCTCCAAGGCTGTGGAAAATTGTAATTCAGATACTGCTGTTCCTGACAATGTATCAGCAAATCTTCTAGAAATCCCATCTGATGCCGTGGAAAATTCTCTCCCTACGTCTTTGGTAACACCGGAAAAGGCCGTGGAAGGTTGCAATAAGTCATTCCTTGAAGATGAACAAGATATGTCAATTAAGATGAGTGATATCGATGTTGTTCATGGTAGTGGCAGGAATAGGCGTAGTGGCCGGTTGCATAATGTTAAAGTCTGCCAGAAGCTGCAGCCTGTGTCTGGAGATCCTCTCAAGCATCCAGAGGAAGAGCAGAGCTCTACATTAAAGGCAGTGGAAAATTGTGATTATGATACTGCTGTTCCTGATAACGTATCAGCAAAACTTCCAGAAATACCATCTGATGCTGTGGAAAAGTTTTTTCCTACTCTGGTATCACTGGATAAGACCACAGGAGATTGCAATAAGGCATTCCTTGAAGATGAACACGATATGTCAATTAAGACGGGTGAGGTCAACGTTGTTCATGGTAGTGGTGGGAATAGACGTAGTGCCCGGTTGCATAATAATGTTAAACTCAACCAGAAGAAGCAACCTGCTTTTGGAGGTCCTGCAACACATCCAGATAAAGACCAAATCTCTGCCTCAGCTGCTCTGGAGAAGAGTGATGGAAGACTGGAAACTCTATCGACACCCGTTCAACCACAAAAGGGAATAGTAAACACATTGTCTGGGAAGGTCACTAATAAATCCAGATCCAGAATTTCCAAAACTCCTTCAGCAAAAACTGAAGGatgttataagaaaaaaaaggtgACGGTTGAAAGAGAAGCTGTCAGGCCTAagagaaaatttattaaatccGCATCTTCTGTGAAATCTCCACAAGGAAGTGATCTAAGTCCACTGAACAAGGGAAGTAAACAGAGATTATCCACAATGTCTCCGGAGTCCTTGAGTCTCAAAAAATCTAGATCTGGTAGGTTACTTCTACCTCCCTTAGAGTTTTGGCGCAATCAAATACCTATTTTTAATGGGGACCATGAAGTTACAGAAATTCAGGAAGGCTCGTCTTTGATATCACCATCATTGGGCAGGTCGTGA 1743 0.4217 MADSTPTASTSNATTTYSCFQRTVTLYDWWLVKSQNDIQGNCFAISGVSSRKEEAVRVFNSAPIIKRYDEFSLETADGIYVVIRGFINKQRTLDNGFTSEIFKSFLFGFPQNWESCALGCFREEAEAGAYSVNVMDNVSAVFEEISADGEEKSIPTSPMLPEETPEKGMSGLDVCGRGGNKRRSRLHNINVCQRKKQHASRSPLKCPDEELSYTSKAVENCNSDTAVPDNVSANLLEIPSDAVENSLPTSLVTPEKAVEGCNKSFLEDEQDMSIKMSDIDVVHGSGRNRRSGRLHNVKVCQKLQPVSGDPLKHPEEEQSSTLKAVENCDYDTAVPDNVSAKLPEIPSDAVEKFFPTLVSLDKTTGDCNKAFLEDEHDMSIKTGEVNVVHGSGGNRRSARLHNNVKLNQKKQPAFGGPATHPDKDQISASAALEKSDGRLETLSTPVQPQKGIVNTLSGKVTNKSRSRISKTPSAKTEGCYKKKKVTVEREAVRPKRKFIKSASSVKSPQGSDLSPLNKGSKQRLSTMSPESLSLKKSRSGRLLLPPLEFWRNQIPIFNGDHEVTEIQEGSSLISPSLGRS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00671 580 MobiDBLite consensus disorder prediction 502 535 - -
Tsu05g00671 580 PANTHER MIS18-BINDING PROTEIN 1 10 576 - -
Tsu05g00671 580 MobiDBLite consensus disorder prediction 151 171 - -
Tsu05g00671 580 MobiDBLite consensus disorder prediction 498 537 - -
Tsu05g00671 580 Pfam SANTA (SANT Associated) 24 115 IPR015216 -
Tsu05g00671 580 PANTHER MIS18-BINDING PROTEIN 1 10 576 IPR039110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00671 Tsu-Chr5 5621912 5627114 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu05g00671 SANTA 1.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00671 - - mtr:MTR_1g069020 737.643