Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00666 ATGTCGTTTTCTTTATTCTCCACTCCTCAACAACCGCAACAACAATCACAACTCTTTCAACCACAACAATCTCCTTTTCAGCAGCAGAGTAATTTGTTccagaatcaacaacaacaacaacaacagcaacaatttcaacaacaacaatttcaaGTGCAACAGcagcaacagcagcagcagcagcagcaattGTTTTTGTTCACTAACGATAGAACTCCGGCGAGTTACAGCACCAATTGGGCGGATCTACATCCTGATTCCCAGAAATATCTACTTCAGATCGAGGAACGGATATTGGAGTATAGAGATGAAAGTCAGAGACTTGATCAGTGTAATCGTCTTTATGATTCGTCTGTTTCAAACGATGGATTTGAGGTTGATGCAAGCCATATTGTTCAGGAACTTGGTGGAATCGGCACTGCTATGGAACGACAGAAAACTTTACTACAGGAACTGATGTCAGCTGTTAAGGATATGTTACGTAATACAGAGGTTGCTGTTCGTTCCTTTATGATGCTACGTCCAAGGTTCTTTCATCCCAGTGCGGGAGCATCAAGTGCCACTGCCCCATCACAGACCCCTGGAGCCACAGCACCTAGTTCGAGCATCCAACCAACATCTACATCTATAGTGCCTGTTTTTGATTTCTACAGTGGTCTTCCAAAGAAACCATCACCCTTTTTACAACAAACAGTTCTTAGATTTGAGAAATATCTTTGTGAATGTCATCAGTGGATTCAAGAGTTAGAGCAGCTGCTTCTCTTAGACTCTGAAAAAAACGGTTCCAGTAATGGATCCTCGTTATTGCAATCTCTTCCGAAAGTCATgacaaatgtgcatgactttTTTGTTCACGTGGCTGCAAAGGTGGAGAGCATTCACCAGTACATGGAATCTATGAAATCAGCATACCTAGCTGATCAGCGCCGCCACGGGGAGGTGAATGATCCATTTCTAGAGGCTGATCGTCGAGAAACTGCACGCCAAGAAGCAGCATCAAAAAGAGTTCATCCAACATTGCATTTACCCGCAAATTCACAACCCTCAACTCAAGTTGCTGGGTTGTTTTCCAGTTCAGGAACTCAAGGAGCATTGACTTCCCAACATACTGCTGCAACAACTTCATCTTTGTCAACAGGAAGTGGTTTATCTCTTTTTAGCACACCGACTTCTGccccatcatcatcatccatgcCATCTTTGTTTGCAACACCAACAACTCCTGCTGCAGGATCCTCATGGTATACCCCATCAATTTTTAGTTCTGCATCATCAACTCCTGCGACATCAACTCCCTCTTTGTTCAGTAATAGTACTCCGCTGTTTAATTCAACTCCGGCTGGAAGCTCAATCTTTTCAACTCCGTTTGCTTCAGGGGCTGCAACAGGATCAGGAAGCTTTGGGGGATCCAAAAATCCACGGCCAAAATCCAGAACTGCTCGGCGCTAA 1449 0.403 MSFSLFSTPQQPQQQSQLFQPQQSPFQQQSNLFQNQQQQQQQQQFQQQQFQVQQQQQQQQQQQLFLFTNDRTPASYSTNWADLHPDSQKYLLQIEERILEYRDESQRLDQCNRLYDSSVSNDGFEVDASHIVQELGGIGTAMERQKTLLQELMSAVKDMLRNTEVAVRSFMMLRPRFFHPSAGASSATAPSQTPGATAPSSSIQPTSTSIVPVFDFYSGLPKKPSPFLQQTVLRFEKYLCECHQWIQELEQLLLLDSEKNGSSNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYMESMKSAYLADQRRHGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGALTSQHTAATTSSLSTGSGLSLFSTPTSAPSSSSMPSLFATPTTPAAGSSWYTPSIFSSASSTPATSTPSLFSNSTPLFNSTPAGSSIFSTPFASGAATGSGSFGGSKNPRPKSRTARR 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00666 482 MobiDBLite consensus disorder prediction 453 482 - -
Tsu05g00666 482 MobiDBLite consensus disorder prediction 340 401 - -
Tsu05g00666 482 MobiDBLite consensus disorder prediction 453 473 - -
Tsu05g00666 482 MobiDBLite consensus disorder prediction 183 205 - -
Tsu05g00666 482 Coils Coil 142 162 - -
Tsu05g00666 482 MobiDBLite consensus disorder prediction 184 205 - -
Tsu05g00666 482 MobiDBLite consensus disorder prediction 323 401 - -
Tsu05g00666 482 MobiDBLite consensus disorder prediction 1 33 - -
Tsu05g00666 482 Gene3D - 223 313 - -
Tsu05g00666 482 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 5 437 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00666 64 482 NAC Transcription Factor Family AT4G37130 61.927 1.85e-171 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00666 K14307 - gmx:100776992 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00666 05 5587189 5592872 Tsu05g00666 05 5587189 5592872 ECH