Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00655 ATGGCGGATCTATTCAGTGGAGGTGCAGTTGGAGCTTTGATGGGAGAAACTGTGAAATATGCACTTGAGACATACAAAAAGGGTCGAGAATTTCGTCCCACACTCCAAACCAACATAGAAACTTTAGATGCTTTGGCTCCATTGGTTGAAAAGATGAAAGATTTCAACGATTTGTTGGACCGACCGAGCGAAGAGATAGAAAGGTTAGAGAAACATATGAGAGAAGGTAaagaaattgtagaaaaaagtaagaaatttaCTTGGAggaagtttttttcttttcctggTCAACAAGTAAAACTTAAGAAACAAGATGATAAACTTAAGAGAGATTTGTCTGTTATTGTTCAAGCTCAGAATAAAAGGGATTTGATGGAGGTGTTGACTAAGGTCAATGgaatttttgagattttgatgAGAAAAGATAAGTTGGGTCAGTTTGATGGGAATGAAATTAGGGGTTCGTGTGGTGCTCCTGATGAGCCTCAATGTAAGGGAATGGTTGAACCTTTAAATAAGTTGAAGATTGAAATGATGAAGAATGGTGTTTCTGTACATGTATTGACTGGTTTGGGTGGATCAGGTAAAAGTACTCTTGCTAAGAAGCTTTGTTGGGATCCACAAATCAAAGGCAAGTTTGGTGGAAACATCTTCTTTGTTACCGTCTCAAAAACTCCCAACTTGAAGAACATTGTACGGACACTATTTGAACACTGTGGACTTCGTGAGCCTAAATTTCATAGCAACGAAGATGCAATTAACCGATTAGGACTTTTGCTGAAGCAAGTTGGTAGAAATCCAATATTATTAGTCTTGGATGATGTTTGGCCTGGTTCTGAAGGCCTTGTTGAgaagtttaaatttcaattgTCAGATTATAAGATTTTGGTGACTTCAAGGGTTGCATTTAAAAGATTTGGCACCCCATTCCCATTGGATCCACTTGATCATGATCATGCAGTGtcccttttccatcactttgcTCAATTGAATCACAACAGGTCATACATGCCGGATAAAAATCTTGTCCGTGAGATAGTCAAAGGTTGTAAGGGTTCGCCACTGGCGCTTCAGGTCATTGCTGGATCACTCTGTCAGCAGCCTATTGAGAAGTGGAAAAATATGAAggaacattttcaaaatcaatccaTTCTAGAGTCTAAAAGATATTTTCCCAGTGATGAAACTGACACTGACTTGCTTTGTCGCCTTCAACAAAGTTTGGATATATTGGAGGATATCAATGAAAAGGAGTGCTTTGCGGATCTAGGGCTATTTCCTGAAGACCAGAGGATCCCTGCTACTGTCCTCATTGATATGTGGGCGACACTGTATAACCTAGATGAAGATGGTACGAAAGCAATGGCCATTGTCCATGATTTAAACACTAGGAATTTGATTAATGTCATAGCTACAAGGAACGTTGCAACAGAAATAGACATGTACTACAATAACCACTATGTAATGATGCATGATCTCCTCAGAGAACTAGCGATCCATCAAAGCAAAGGGGAACcatttgaacaaacaaaaagatTGATCGTTGATTTGAATGGAGATGATCGTCCTGATTGGTGGATAGGACCGAATCAGCAAGGAATGATTAGTCGTATGCACTCATTCGTAACTGGATTGTTCGTAAAACAGAAGCAACTAAAGGTCGATGCTAGTATATTGTCTATATCAACTgATGAAACATTTTCTTCGGATTGGTGTGatatgaaacctgatgaagctAAGGTTCTCATTTTGAATCTTCGGTCTGACCAGTACTCATTACCAGATTTCACCAAAAAAATGAGTAAACTGGAAGTTTTAATAATCACAAATTATGGTTTCCATCGTTCTGAATTAACCAAGTTTGAGCTACTTGGTTTTTTATCAAACTTGAAAAGAATAAGGTTGGAAAAAGTTTCTGTCCCTTCCCTATGCATATTGAAGAATCTGCGGAAATTATCCCTTCACATGTGCAATACAAGGAATGCTTTTGAAAGCTGTTCAATCCAAATTTCAGATGCTATGCCAAATCTAGAGGAGTTGAGCATTGACTATTGTAAAGATTTGATTAAATTGCCTGATGGACTTTGTAACATAACCACATTGAAGAAGCTCAGTATCACCAACTGCCGCAAGCTTTCTGCATTACCTCATGATATTAAAAACCTGGAGAATTTGGAAGTGCTAAGGCTTTGTTCCTGTTCTGATTTAGAAGAGATGCCGGAATCTGTTGCAGGCCTTAACAAGTTACGCTGTCTCGACATCTCAGACTGTGTGAGTCTTTCAAAATTACCGGATAATATTGGTCACTTGCAAAAGCTTGAGAAGCTCTCCATTAAGGGTTGCTCAGAGTTGAGTGGATTGCCTAATTCTGTCATCAAATTTGGAAATTTAAATCATGAGATGCATGTGATCTGTGATGAAGAAGGTTTTGCCTTATGGGAATGGTTTCCCAACATTCCCAATATAAAGATAGTTAAGGCTAAAGTAGAAATTAACTTAAATTGGCTTCATAGAACTTGTTCCTGA 2526 0.3626 MADLFSGGAVGALMGETVKYALETYKKGREFRPTLQTNIETLDALAPLVEKMKDFNDLLDRPSEEIERLEKHMREGKEIVEKSKKFTWRKFFSFPGQQVKLKKQDDKLKRDLSVIVQAQNKRDLMEVLTKVNGIFEILMRKDKLGQFDGNEIRGSCGAPDEPQCKGMVEPLNKLKIEMMKNGVSVHVLTGLGGSGKSTLAKKLCWDPQIKGKFGGNIFFVTVSKTPNLKNIVRTLFEHCGLREPKFHSNEDAINRLGLLLKQVGRNPILLVLDDVWPGSEGLVEKFKFQLSDYKILVTSRVAFKRFGTPFPLDPLDHDHAVSLFHHFAQLNHNRSYMPDKNLVREIVKGCKGSPLALQVIAGSLCQQPIEKWKNMKEHFQNQSILESKRYFPSDETDTDLLCRLQQSLDILEDINEKECFADLGLFPEDQRIPATVLIDMWATLYNLDEDGTKAMAIVHDLNTRNLINVIATRNVATEIDMYYNNHYVMMHDLLRELAIHQSKGEPFEQTKRLIVDLNGDDRPDWWIGPNQQGMISRMHSFVTGLFVKQKQLKVDASILSISTDETFSSDWCDMKPDEAKVLILNLRSDQYSLPDFTKKMSKLEVLIITNYGFHRSELTKFELLGFLSNLKRIRLEKVSVPSLCILKNLRKLSLHMCNTRNAFESCSIQISDAMPNLEELSIDYCKDLIKLPDGLCNITTLKKLSITNCRKLSALPHDIKNLENLEVLRLCSCSDLEEMPESVAGLNKLRCLDISDCVSLSKLPDNIGHLQKLEKLSIKGCSELSGLPNSVIKFGNLNHEMHVICDEEGFALWEWFPNIPNIKIVKAKVEINLNWLHRTCS 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00655 841 Gene3D - 404 502 IPR036388 -
Tsu05g00655 841 Gene3D - 159 305 IPR027417 -
Tsu05g00655 841 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 824 IPR039203 GO:0050832
Tsu05g00655 841 Gene3D Ribonuclease Inhibitor 552 805 IPR032675 -
Tsu05g00655 841 Pfam NB-ARC domain 172 385 IPR002182 GO:0043531
Tsu05g00655 841 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 2 131 IPR008808 -
Tsu05g00655 841 ProSiteProfiles RPW8 domain profile. 1 150 IPR008808 -
Tsu05g00655 841 PRINTS Disease resistance protein signature 185 200 - -
Tsu05g00655 841 PRINTS Disease resistance protein signature 262 276 - -
Tsu05g00655 841 PRINTS Disease resistance protein signature 720 736 - -
Tsu05g00655 841 PRINTS Disease resistance protein signature 350 364 - -
Tsu05g00655 841 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 423 IPR027417 -
Tsu05g00655 841 Gene3D - 314 391 IPR042197 -
Tsu05g00655 841 SUPERFAMILY RNI-like 592 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00655 Tsu-Chr5 5477370 5486737 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00655 627 803 WRKY Transcription Factor Family AT4G12020 25.373 2.55e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00655 - - gmx:100792590 1170.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00655 05 5477370 5486737 Tsu05g00655 05 5477370 5486737 ECH
Tsu05g00655 05 5477370 5486737 Tsu04g03300 04 42083398 42103139 PCT