Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00653 ATGAATCCTCCTCCGCCGTCCATGGCTACCGGAGCAACCATTGATATGCCGATCATGCACGATAGTGACCGTTATGATTTTGTTCGTGATATTGGATCAGGGAATTTCGGTGTTGCTAGACTCATGAGAGATAAACATACTAAAGAGCTTGTTGCTGTTAAGTATATTGAACGTGGTGATAAGATTGATGAAAATGTTAAGAGAGAAATAATCAATCACAGGTCTCTGAGACATCCAAATATTGTCAGGTTCAAGGAGGTAATTTTGACCCCTACTCATCTGGCTATTGTAATGGAATATGCATCTGGAGGAGAAATGTTTGAACGAATCAGCAAAGCAGGACGTTTTACTGAGGATGAGGCTCGTTTCTTCTTTCAACAACTCATATCTGGGGTCAGCTATTGTCATTCAATGCAAATATGTCATCGGGACCTGAAGTTGGAAAACACTTTGTTGGATGGAGACCCAGCACTTCATTTGAAGATTTGTGATTTTGGATACTCCAAGTCTTCGGTGCTTCATTCGCAACCAAAGTCAACTGTGGGAACTCCGGCATATATTGCTCCAGAAGTACTGCTGAAGCAAGAGTATGATGGAAAGGTTGCAGATGTATGGTCATGTGGAGTAACCTTATACGTGATGCTAGTAGGATCATATCCCTTTGAAGATCCCGTTAATCCGAAGGATTTCCGGAAGACAATTCAGAGGGTTCTCAGTGTCCAGTATTCCGTTCCAGACTTTGTTGAAATATCTCCTGAATGTCGCGACATTATATcaagaatttttgtttttgaccctGCCGAGAGAATCACCATTCCGGaaataatgaaaaatgaatGGTTTCGGAGGAATCTTCCTGCTGACTTGGTGAATGAAAAGGTATTGGATAACCAATTTGAAGAGCCAGATCAGCCCATGCAGAGCATCGATACGATCATGCAGATAATTTCAGAGGCTACCGTACCAGCAGCTGGGAGCTATTATTTAGACGAGTTTATGACTGATAATATGGATGATGACATGGATGATATAGACTCTGACTATGAACTTGATGTAGATAGCAGCGGGGAGATTGTATATGCCATATAA 1089 0.4059 MNPPPPSMATGATIDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKHTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEMFERISKAGRFTEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGDPALHLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKVADVWSCGVTLYVMLVGSYPFEDPVNPKDFRKTIQRVLSVQYSVPDFVEISPECRDIISRIFVFDPAERITIPEIMKNEWFRRNLPADLVNEKVLDNQFEEPDQPMQSIDTIMQIISEATVPAAGSYYLDEFMTDNMDDDMDDIDSDYELDVDSSGEIVYAI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00653 362 PANTHER SERINE/THREONINE KINASE 16 356 - -
Tsu05g00653 362 SMART serkin_6 25 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00653 362 Gene3D Phosphorylase Kinase; domain 1 6 100 - -
Tsu05g00653 362 Gene3D Transferase(Phosphotransferase) domain 1 101 289 - -
Tsu05g00653 362 ProSiteProfiles Protein kinase domain profile. 25 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00653 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Tsu05g00653 362 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Tsu05g00653 362 Pfam Protein kinase domain 25 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00653 362 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 16 356 - -
Tsu05g00653 362 SUPERFAMILY Protein kinase-like (PK-like) 11 320 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00653 Tsu-Chr5 5462854 5467405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00653 24 285 CBL-interacting serine-threonine protein kinases AT5G25110 43.841 3.07e-69 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Tsu05g00653 Pkinase 1.1e-71 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g03291 04 42046080 42050631 Tsu05g00653 05 5462854 5467405 PCT