Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00648 ATGCGTTGGTTGCCAACCCTAATTTTccctccttcttcttcttcttcctcttcctcttctcatCAACATTCTTCAATcgtttcttcatcttcttccgcTACGTCTCCTTCAACGATTAAATCacctccttcttcttcctccgATACAACCTCGGAACGAAGAAGAAGTACAGGTGGCACGTGGTTTTTTGGTAATGGTAAAAGATCCACGCGATCAAGGAAGCTACGACATGTCGATGATAGTCATGTTGAATACGACGTCGCGCCGATTTCTCGTTCTCCGAGTACACGGAGCTATATTCGGTCTAGTACTTCCGTTGCGCCTCAACCATTGCCATTGCCGGAGTTAGCATTACCATTGCCGGAGTTAGCGTTAGCATCGTCTGTTCCGAGACCTAAAGATGCTGATTGTCGTTTGCCGTCGCCTAAAGAAGCTTCCGGTAGAGCCGAACCTTCCGGAAGAGTTGAACCTTCCGGTAGAATCGAACCTGATGTCAATGTTGTCATTGGTTCCCTTTCTACTGGATTTAAGATGCGCAGTGTTTTTGCTAGCCCAGAGACAAGAAGGAATACAGAGCATATGGAGACAAGGCTGCCGGGGAATGCGATAGCGCGTCAAGATACAAGTGGTGCTGCAACTCCAAGCTTTCGAGGAAATAGCTTCCGTATAAATGTCCCTCCAAGGAGTGCTTCAAACAGTCCCTTTACCAGTCCCACAATCAGCCCACACAACACCAAACACGATGACTTTGTGCCATATTATTATGTGTCACCTAAAGCAAATCATTTCTGGTCTGCACCAGAAATGCCAACATCTTCAGGGCAACCTCCTCCTGCTTTCTTTGATTTATCTGCATTAGGCATTGATTGTGCCACTTCTCCCCATCAAAGTTCTGGGGCAAAAAGTCCCAGACAACAAAATCCCAAAAGCCCAACTAGTTCTTCACCCCTACCAAGGTTGTCCCTTGACTACCCAACAACTACACGCCGTGAAAGTATTGTTCCTCTTCTCAGTGTTCATCCTTTACCTTTGCCTCCTTGGCCCGGGACTTCCTTACCTTCACCCTCTGGTACATATTCCCAGCCTGGGGGGGCTAAGACAGAATCGGTATCGATGAAAAGTCAATGGCAAAAGGGTAAACTTATAGGGCGAGGTACCTTTGGAAGTGTTTACGTTGCCACTAATAGAGAAACTGGAGCATTGTGTGCAATGAAGGAAGCAGAAATATTTTCTGATGATCCAAAATCTGCCGAAAGTATAAAGCAGCTAGAACAGGAAATCAAGGTTCTTAGCCAGCTGAAACATCCAAACATTGTGCAGTATTATGGTAGTGAAATAATAGAAGAcaagttttatatttatttggaGTTTATCCATCCTGgctcaataaataaatatgtccGTGACCACTGTGGTGCGGTAACAGAATCCGTTGTTCGGAATTTCACACGACATATTCTTTCGGGGTTGACTTACTTGCATAGCAAAAAGACAATTCATAGGGATATCAAAGGGGCTAACTTGCTTGTTGATTCTTCTGGTGTTGTTAAGCTTGCTGATTTTGGGATGGCCAAGCATTTAACTGGCCATTCTGCTGATCTGTCTTTGAAAGGAAGTCCATACTGGATGGCTCCAGAGCTAATGCAAGCGGTCATACATAAAGATAACAGCCCTGATCTAGCTTTTGCTATTGATATTTGGAGTTTGGGTTGTACAATTATTGAAATGTTCACAGGGAAGCCTCCGTGGAGTGAATACGAAGGAGCTGCAGCTATGTTTAAGGTAATGAAGGATACCCCTGCTATACCTGAAACATTGTCACAAGAAGGTAAAGATTTCTTGAGGCTTTGCTTTAAAAGAAATCCAGCAGAGCGGCCAACTGCTTCAATGTTATTAGAGCATCGGTTTCTGAAAAACTTACAATATTCGGATCCTTCACCTTCTTCCCATTTGTATAATGGAACAACCTTAATGGATAAACCCCATAGTCCCAGAGGGTTATTAGAAAACAGACCTGATCAGTTTTCTATCGTCAGTGCACAGATTGCAAAAGGGAAATCTTCCATTGATAGTGGCATTGCAATGTCCTACTCGCTCTACTCTTGA 2106 0.4169 MRWLPTLIFPPSSSSSSSSSHQHSSIVSSSSSATSPSTIKSPPSSSSDTTSERRRSTGGTWFFGNGKRSTRSRKLRHVDDSHVEYDVAPISRSPSTRSYIRSSTSVAPQPLPLPELALPLPELALASSVPRPKDADCRLPSPKEASGRAEPSGRVEPSGRIEPDVNVVIGSLSTGFKMRSVFASPETRRNTEHMETRLPGNAIARQDTSGAATPSFRGNSFRINVPPRSASNSPFTSPTISPHNTKHDDFVPYYYVSPKANHFWSAPEMPTSSGQPPPAFFDLSALGIDCATSPHQSSGAKSPRQQNPKSPTSSSPLPRLSLDYPTTTRRESIVPLLSVHPLPLPPWPGTSLPSPSGTYSQPGGAKTESVSMKSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEAEIFSDDPKSAESIKQLEQEIKVLSQLKHPNIVQYYGSEIIEDKFYIYLEFIHPGSINKYVRDHCGAVTESVVRNFTRHILSGLTYLHSKKTIHRDIKGANLLVDSSGVVKLADFGMAKHLTGHSADLSLKGSPYWMAPELMQAVIHKDNSPDLAFAIDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMKDTPAIPETLSQEGKDFLRLCFKRNPAERPTASMLLEHRFLKNLQYSDPSPSSHLYNGTTLMDKPHSPRGLLENRPDQFSIVSAQIAKGKSSIDSGIAMSYSLYS 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00648 701 SUPERFAMILY Protein kinase-like (PK-like) 371 665 IPR011009 -
Tsu05g00648 701 MobiDBLite consensus disorder prediction 91 109 - -
Tsu05g00648 701 MobiDBLite consensus disorder prediction 291 323 - -
Tsu05g00648 701 ProSitePatterns Protein kinases ATP-binding region signature. 382 405 IPR017441 GO:0005524
Tsu05g00648 701 Pfam Protein kinase domain 377 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00648 701 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 685 - -
Tsu05g00648 701 MobiDBLite consensus disorder prediction 8 67 - -
Tsu05g00648 701 SMART serkin_6 376 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00648 701 MobiDBLite consensus disorder prediction 1 113 - -
Tsu05g00648 701 MobiDBLite consensus disorder prediction 344 371 - -
Tsu05g00648 701 Gene3D Transferase(Phosphotransferase) domain 1 372 659 - -
Tsu05g00648 701 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 685 - -
Tsu05g00648 701 MobiDBLite consensus disorder prediction 353 371 - -
Tsu05g00648 701 MobiDBLite consensus disorder prediction 129 162 - -
Tsu05g00648 701 ProSiteProfiles Protein kinase domain profile. 376 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00648 Tsu-Chr5 5399670 5404023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00648 219 659 MAP Kinase Kinase Kinase AT5G66850 65.310 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tsu05g00648 Pkinase 2.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00648 - - cam:101502514 1021.92