Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00635 ATGAAGAAATTCGAATCGCAGCGTACTTTCATAGTTTCATCAATGGAGATTTCTCAGGTAGGTGTCAGGACACGATCTCGAGCTGCATTAGCTATGGAAGAACAAGCTACAAGTTCAGCCGCACAACGAATTCCAAAGAGAAGAAAGATCAACAACAGAAACGAAAAACgtaaattatcaaaaaagtCACCGACGGTTTTACCGGAACCTGAACCTTCCTCCGGTTCTATCTCCGACGAAGAATTTCCGGCGTCGTGTTGTTCTAGCAATGGATCCGTTGGAATCACCGAAGAAAGGATCAAATCGTTAGATCTAGAGGTGGAGAGAGCGCAAGTTGAAACGTCGACGTGCAATTGCGGTGAAGAAGAAACACAGAgAATATTTTGTGAGTGTAGGAGAGAGATGAATCGTTCAAGCGAGTTTCAAGGAAATTCTCAAGAGCTTGAGTCAATGGAAACAAATTCTCATCGTCAAAATTCATCTCCTAAAAATATGCCAACAGAATTTGAGCTTGAAGAATTTTTCTCTGTTGCTGAGAAAAACATTCAGAAAAAGTTTCAAGAAAAgTATAATTATGATATTGTGAAGGACGTTCCATTGGAAGGACGCTACGAGTGGGTTCAGTTGAAGCAATGA 636 0.3994 MKKFESQRTFIVSSMEISQVGVRTRSRAALAMEEQATSSAAQRIPKRRKINNRNEKRKLSKKSPTVLPEPEPSSGSISDEEFPASCCSSNGSVGITEERIKSLDLEVERAQVETSTCNCGEEETQRIFCECRREMNRSSEFQGNSQELESMETNSHRQNSSPKNMPTEFELEEFFSVAEKNIQKKFQEKYNYDIVKDVPLEGRYEWVQLKQ 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00635 211 Pfam Cyclin-dependent kinase inhibitor 165 209 IPR003175 GO:0004861|GO:0005634|GO:0051726
Tsu05g00635 211 Coils Coil 93 113 - -
Tsu05g00635 211 MobiDBLite consensus disorder prediction 67 90 - -
Tsu05g00635 211 Gene3D p27 121 211 IPR044898 -
Tsu05g00635 211 MobiDBLite consensus disorder prediction 31 45 - -
Tsu05g00635 211 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 17 210 IPR044275 GO:0004861|GO:0045736|GO:0051726
Tsu05g00635 211 MobiDBLite consensus disorder prediction 31 90 - -
Tsu05g00635 211 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 7 17 210 - -
Tsu05g00635 211 MobiDBLite consensus disorder prediction 139 165 - -
Tsu05g00635 211 PIRSF CKI_KRP_plant 4 211 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00635 Tsu-Chr5 5270141 5272044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00635 132 210 Core Cell Cycle Gene Families AT1G49620 48.810 1.16e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00635 - - gmx:548057 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00635 05 5270141 5272044 Tsu05g00635 05 5270141 5272044 ECH
Tsu05g00635 05 5270141 5272044 Tsu04g03258 04 41533109 41535258 PCT