Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00634 ATGAATTGGGTTCGTGGTCGCTTGTTAGAATACGCCGCTGGTGGTACTCTCTTTGATCAGCTCAAGAATTACGGTGGCAAGTTACCGGAAACCCTCGTTCATTGTTACACGAGGTCTGTCCTTGAAGGACTTAAACATGTTCATGAAAGTGGTTTCCTTCACTGTGACGTGAAGCTACAAAATATTCTTGTAATGGAGGATGGCAATGTTAAGATTTCAGATTTTGGTCTTGCAAAGGAGAAAGGTTTAAAGAATGATGGAAAATTGGAATTGAGGGGAACTCCGATGTTTATATTGCCAGAAGCGGTGAACGATAATGTTTATGAATCGCCAGCGGATATATGGGCTCTTGGTTGCGCGGTAGTGGAGATGATTACGGGAAACCCTGCATGGAATTTTAGTGGATCGAATATATGGTCCTTGTTGATTAGAACTGGGGTAGGAGAAGAATTACCATTAATTCCAGATGAATTGTCACGAGAAggaaaagattttcttcaaaaaatattcgTGAAGGATCTGTTGAAAAGATGGACCGCGGAGATGCTATTGAAACATCCTTTTATctccaatgataaaaatgtTTCATTGGTGAAAGAGTTACTTAATTTTCCTACGGAATTTGAGTAG 630 0.381 MNWVRGRLLEYAAGGTLFDQLKNYGGKLPETLVHCYTRSVLEGLKHVHESGFLHCDVKLQNILVMEDGNVKISDFGLAKEKGLKNDGKLELRGTPMFILPEAVNDNVYESPADIWALGCAVVEMITGNPAWNFSGSNIWSLLIRTGVGEELPLIPDELSREGKDFLQKIFVKDLLKRWTAEMLLKHPFISNDKNVSLVKELLNFPTEFE 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00634 209 Pfam Protein kinase domain 9 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00634 209 SMART serkin_6 3 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00634 209 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 8 194 - -
Tsu05g00634 209 SUPERFAMILY Protein kinase-like (PK-like) 9 202 IPR011009 -
Tsu05g00634 209 ProSiteProfiles Protein kinase domain profile. 1 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00634 209 Gene3D Transferase(Phosphotransferase) domain 1 7 206 - -
Tsu05g00634 209 ProSitePatterns Serine/Threonine protein kinases active-site signature. 52 64 IPR008271 GO:0004672|GO:0006468
Tsu05g00634 209 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 8 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00634 Tsu-Chr5 5257983 5258832 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00634 8 192 MAP Kinase Kinase Kinase AT4G36950 55.851 6.86e-72 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tsu05g00634 Pkinase 1.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00634 - - gmx:100797177 282.337