Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00628 ATGGCCATGGATAGCATCGATACTCCGTCTTCACCTTCTCAGTCTCAATATCAGATTGGTCACCCGCGTCATTTCTACCTCGCAGTAGACAGACTCCAATTCAAAATgCAAACTTTGGTTGATCTTCTTGATTTGGTGGGTCGGCGTCCTTGTTTGCCTATTGTTGTCTGTTGCAGCACTCGTGATGACCTTGACTCTCTCTGTTCTTCTCTTTCACCTCTCCCTTTCATTTCATCTTCTGCTTTGTACAGTGACCTTGCTGAAGATGAACGAGCTTTAGTTTTAGAGAAATTTTCTCAAGTGACAACTAGATGGAATCAGATTAGTCATGCTGGAGCAGAGAATGAGGATGATATTGGGAAAGATGATAGATCTCATATGATTATTGTGACAGATGCTTGCCTTCCTCTTCTTACTTCAGGGGAGTCTCCCTTGAATGCTCATCTTCTCATTAACTATGAGTTACCGGCAAAAAAGGAAACATACGGAAGGCGCTTGGCTGCTTGTTTAACAGCTGATGGAATTGTTATCAATATGGTTGTTGGTGGGGAAGTGGTAACTCTAAAAAGTATCGAAGAAAGCACCGGTATTGTCATGCAAGAGATGCCAATGCAAATTCTTGACATCTTATGA 633 0.4202 MAMDSIDTPSSPSQSQYQIGHPRHFYLAVDRLQFKMQTLVDLLDLVGRRPCLPIVVCCSTRDDLDSLCSSLSPLPFISSSALYSDLAEDERALVLEKFSQVTTRWNQISHAGAENEDDIGKDDRSHMIIVTDACLPLLTSGESPLNAHLLINYELPAKKETYGRRLAACLTADGIVINMVVGGEVVTLKSIEESTGIVMQEMPMQILDIL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00628 210 Gene3D - 18 210 IPR027417 -
Tsu05g00628 210 PANTHER INITIATION FACTOR 4A-LIKE PROTEIN 3 207 - -
Tsu05g00628 210 PANTHER RNA HELICASE 3 207 - -
Tsu05g00628 210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 207 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00628 Tsu-Chr5 5215061 5218603 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00628 23 210 Eukaryotic Initiation Factors Gene Family AT3G19760 24.737 2.88e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00628 - K03257 gmx:100791017 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00628 05 5215061 5218603 Tsu05g00628 05 5215061 5218603 ECH