Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00612 ATGGAAGAAACAAAATGGATGATACCCACTTCACTTTTTCTCCTCACATTTCTCATCCTTTTAAAATTCACACTAAAGAAACAAATCAAGCACAAAAACCTCCCTCCTTCCCCACCTTCTTTACCATTTATAGGccatcttcatctcttcaaACAACCCTTACATCGTAGTCTTAGCAGGCTTGCAAAAATCTACGGTCATGTATTCTTCCTCCGCGTGGGCACACGCAACATCCTTGTCGTCTCTTCACCTTCCGCGGTAGAAGAATGTTTGTCAAATAATGATATTACGTTTGCAAATCGTACATCTCTAACACTTGCTGGAAAATATCTCAATTATAATTATAGGACATTAGGTTTTTCTTCCTACGGTGAACTTTGGCGCAAACTACGTCGTTTAACAACAACGGAGCTTTTCTCCACCAATCGTCTTGCCATGTTAACCAATGTTCGAGAGGAAGAAGTGAAATTGTTAGTTAAGCAAATATTCGAAGGGTGCAAAGGAAAATTAATATCAAAGGTTGATCTCAAAACGAAAACTTTAGAACTTTCTTTCAACATCATGTTGAGAGTGATATCGGGGAAACGTTACTATGGCGAGGATGCGGTTGCGTTAGAAGGAAAGGAGTTTCAAattttaatgaatgaatatgtAGAGCTTCTTGGAAGTGGgaatttgaatgatttttttcctATACTAAAATGGATTGATTTTCAagggaagaaaaagaagatggTGAAGTTGATGAAAAAAATGGATTGTTTTCTTCAAAAGCTACTTGATGAGAAACGAAGAAATTGGAGCAATGATCAAAGAAATATGACGTTGATTGATGTTATGTTGGACTTGCAACAAAAGGAGCCAGAATTCTATACACACGATATAGTGAAAGGTGTTATTTTGGTAATGCTTGTAGCTGGCTCTGAGACTTCAGCTACAACCATGGAATGGGCACTCTCACTTCTCCTAAACCATCCAGAAAAAATGAATAAGGTAAGAGTTGAGATAGACACTtgtttgggacaagaaaaactTATGAATGAATCAGATGCTTTGAAACTAAACTACTTGCAAAAGGTAATTATGGAGACACTTCGTTTATACCCTGTGGCTCCATTATTAATACCACATGAGTCTTCCAATGATTGTAATGTTTGTGGATTTAATATACCAAGAGGGACAATGCTTCTTGTGAATCTATGGACACTACATAGAGACCCTAACTTATGGGTAAATCCAACAAGATTTATGCCAGAGAGATTTGAAGAAGGAGAATTAATAGGTAATGATGAATTAATTTACAATATGCTTCCATTTGGTATTGGAAGGAGATCTTGTCCTGGATCTGTTTTAGCAAAACGTTTTATGGGACATGCAATAGGGTCTTTGATTCAATCTTTTGATTGGGAGAGAATAGGAGATGAAAAAATTGATATGACTGATGGAATAGGGCTTACAATGCCTAAAGTTGAACCTTTGGTTGCATTATGCAAGCCACGCCAAGTTATGATCAAGGCTTTGTCCAATATGTAG 1533 0.3496 MEETKWMIPTSLFLLTFLILLKFTLKKQIKHKNLPPSPPSLPFIGHLHLFKQPLHRSLSRLAKIYGHVFFLRVGTRNILVVSSPSAVEECLSNNDITFANRTSLTLAGKYLNYNYRTLGFSSYGELWRKLRRLTTTELFSTNRLAMLTNVREEEVKLLVKQIFEGCKGKLISKVDLKTKTLELSFNIMLRVISGKRYYGEDAVALEGKEFQILMNEYVELLGSGNLNDFFPILKWIDFQGKKKKMVKLMKKMDCFLQKLLDEKRRNWSNDQRNMTLIDVMLDLQQKEPEFYTHDIVKGVILVMLVAGSETSATTMEWALSLLLNHPEKMNKVRVEIDTCLGQEKLMNESDALKLNYLQKVIMETLRLYPVAPLLIPHESSNDCNVCGFNIPRGTMLLVNLWTLHRDPNLWVNPTRFMPERFEEGELIGNDELIYNMLPFGIGRRSCPGSVLAKRFMGHAIGSLIQSFDWERIGDEKIDMTDGIGLTMPKVEPLVALCKPRQVMIKALSNM 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00612 510 PANTHER CYTOCHROME P450 82C3-RELATED 9 509 - -
Tsu05g00612 510 SUPERFAMILY Cytochrome P450 35 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00612 510 Gene3D Cytochrome P450 19 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00612 510 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00612 510 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00612 510 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00612 510 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00612 510 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00612 510 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00612 510 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00612 510 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00612 510 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00612 510 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00612 510 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00612 510 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00612 510 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00612 510 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 509 - -
Tsu05g00612 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Tsu05g00612 510 Pfam Cytochrome P450 35 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00612 Tsu-Chr5 5033730 5037882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00612 10 507 Cytochrome P450 AT4G37320 45.187 2.65e-158 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00612 - - gmx:100794610 699.893