Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00610 ATGAATTGGGTTCGTGGTCACTCCCTAGGTAGTGGAAGCTTTGCCACTGTTTATTTAGCCAAACATACGGACGACTCTGAATTTCCATCTCTCACTGCCGTCAAATCATGCGATCTTGACAATTGTTTTTCTCTCCAAAACGAAGAACGTGTACTTGATCGTTTAGGATCATCTCCTTATATTATCAAATGTTTTGGTCACGATCAAACATTTGAAAACAATAAGGagtattataatatatttctcGAATATGCCGCCGGTGGAACTCTCAACGATCAACTATATAATTACGGTGGTAAGTTTCCGGAGAAACTTGTTCGTCGTTACACAAGGTCTCTTGTTGAAGGACTTAAGTACATTCATGAAAACGGGTTTGTTCACTGCGACTTGAAGTTAGAAAATATTCTTGCGTTCGACAATGATATGGGCTCTTGGTTGCGTCGTCTTGGAGATGATTACTGGAGAACCAGTGTGGAAGAATGA 483 0.3934 MNWVRGHSLGSGSFATVYLAKHTDDSEFPSLTAVKSCDLDNCFSLQNEERVLDRLGSSPYIIKCFGHDQTFENNKEYYNIFLEYAAGGTLNDQLYNYGGKFPEKLVRRYTRSLVEGLKYIHENGFVHCDLKLENILAFDNDMGSWLRRLGDDYWRTSVEE 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00610 160 ProSitePatterns Protein kinases ATP-binding region signature. 9 35 IPR017441 GO:0005524
Tsu05g00610 160 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 139 - -
Tsu05g00610 160 Pfam Protein kinase domain 5 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00610 160 SMART serkin_6 3 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00610 160 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 139 - -
Tsu05g00610 160 Gene3D Transferase(Phosphotransferase) domain 1 2 147 - -
Tsu05g00610 160 ProSiteProfiles Protein kinase domain profile. 3 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00610 160 SUPERFAMILY Protein kinase-like (PK-like) 3 139 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00610 Tsu-Chr5 5025152 5025634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00610 1 151 MAP Kinase Kinase Kinase AT4G36950 49.057 1.25e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tsu05g00610 Pkinase 5.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00610 - - mtr:MTR_5g017140 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00610 05 5025152 5025634 Tsu04g03240 04 41275660 41277013 PCT