Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00607 ATGCACGATCATTCCACCGACACAATGAACGACGACCTTTCAAACCAAACATCAATCTTCGGTCTCCGTTTATGGGTTGTCCTCGGCGTCTCCGTCGGTGTCGCCATCGTCCTCCTTCTCTTCCTCATCTCCGTTTGGCTAGCATTCAAACgtagcaacaacaacaattcaAAAACAGTTAAACCTTCCATCATCCCCGACGACTCTAAAGAAATTCAAGAAATTAAACTCGACCTTATTCCACCTCAACCCGACCCGTTTCCTGAACCCGACccattttcatcatcatcagaacAACATCAACTGCACCCAGAAGAAGAAACTACACCGTTAAGTTACAAAAGAATTCAGTTTGAGATAGGTAAAAATCATAGGATATCTTATCCTGAACAACGTGGTGGTTCTGTTATAAGGTCTTCTAATTCTCGTGAACATAGTGGTGAATCTCGACCGTTGGATCAAGTTTCTACTGTTATTCCTCAAGTTTCTCATCTTGGTTGGGGTCATTGGTATACTCTTAGAGAATTAGAAGATGCTACTAATGCTTTTGCTCCTGAAAATGTTATTGGTGAAGGTGGTTATGGAATTGTTTATCATGGTATTTTGAAGGATAATACTAATATTGCAATTAAGAATTTGCTTAATAATAGAGGACAAGCTGAAAGAGAATTCAAGGTTGAAGTGGAAGCGATCGGACGAGTTCGACATAAGAATTTAGTAAGGTTGCTTGGTTATTGTGCTGAAGGAGCTCATAGAATGCTAGTGTATGAGTTTGTTGACAATGGTAACTTGGAGCAATGGTTACATGGTGATGTTGGGCCTTATAGTCCTCTAACATGGGAGATTCGAATGAACATTATTCTCGGAACGGCTAAAGGTTTGACTTATCTTCATGAGGGGCTAGAACCAAAAGTTGTTCATCGCGATATTAAATCAAGCAACATTTTACTTAATAAGCAATGGAATTCAAAGGTTTCTGATTTTGGCCTTGCAAAACTTCTTAGCCCTGAGAGCAGCTATATTACAACCCGTGTCATGGGTACATTCGGatATGTAGCTCCTGAATATGCAAGTACGGGAATGTTGAACGAACGAAGTGATGTATATAGTTTCGGAATTCTTATTATGGAAGTGATTACAGGCAGGAATCCAGTTGAATATAGTCGTCCTGCCGAAGAGGTGAATTTAGTTGAGTGGCTCAAGAAGATGGTTGGTAACAGAAATCCAGAGGGAGTGTTGGATCCAAAGCTTCCTGAGAAACCAACTTCGAGGGCACTAAAGCGAGCTCTTCTTGTAGCCTTACGCTGCACCGACCCTAATGCACAAAAACGGCCTAAAATGGGGCATGTAATACACATGCTTGAAGCTGAAGATTCACCTTACAAAGAGGAGCGCAGAGTTAGAAGGGATGCAGCCGTAGGAAATTCACCTACCGCCAGAATAGAGGATAGATCGAAAGAGGAGGTGGAGGCCGCTGTATCTATTGATGACGGTATGCTTGAAAACGAGAAGTCAAGTGATGAGACAAGATCAAATCATGAAATAGAGAAGCAATAA 1557 0.4046 MHDHSTDTMNDDLSNQTSIFGLRLWVVLGVSVGVAIVLLLFLISVWLAFKRSNNNNSKTVKPSIIPDDSKEIQEIKLDLIPPQPDPFPEPDPFSSSSEQHQLHPEEETTPLSYKRIQFEIGKNHRISYPEQRGGSVIRSSNSREHSGESRPLDQVSTVIPQVSHLGWGHWYTLRELEDATNAFAPENVIGEGGYGIVYHGILKDNTNIAIKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEFVDNGNLEQWLHGDVGPYSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLNKQWNSKVSDFGLAKLLSPESSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVITGRNPVEYSRPAEEVNLVEWLKKMVGNRNPEGVLDPKLPEKPTSRALKRALLVALRCTDPNAQKRPKMGHVIHMLEAEDSPYKEERRVRRDAAVGNSPTARIEDRSKEEVEAAVSIDDGMLENEKSSDETRSNHEIEKQ 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00607 518 Pfam Protein kinase domain 186 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00607 518 CDD STKc_IRAK 189 455 - -
Tsu05g00607 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Tsu05g00607 518 PANTHER RECEPTOR-LIKE KINASE PLANT 1 504 - -
Tsu05g00607 518 SMART serkin_6 183 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00607 518 MobiDBLite consensus disorder prediction 129 153 - -
Tsu05g00607 518 MobiDBLite consensus disorder prediction 460 518 - -
Tsu05g00607 518 Gene3D Transferase(Phosphotransferase) domain 1 259 473 - -
Tsu05g00607 518 PANTHER OS01G0323000 PROTEIN 1 504 - -
Tsu05g00607 518 ProSiteProfiles Protein kinase domain profile. 183 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00607 518 MobiDBLite consensus disorder prediction 79 108 - -
Tsu05g00607 518 Gene3D Phosphorylase Kinase; domain 1 153 258 - -
Tsu05g00607 518 ProSitePatterns Protein kinases ATP-binding region signature. 189 211 IPR017441 GO:0005524
Tsu05g00607 518 SUPERFAMILY Protein kinase-like (PK-like) 158 455 IPR011009 -
Tsu05g00607 518 Coils Coil 203 223 - -
Tsu05g00607 518 MobiDBLite consensus disorder prediction 500 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00607 Tsu-Chr5 5013263 5016439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00607 164 455 Receptor kinase-like Gene Family AT4G02010 45.455 3.22e-86 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Tsu05g00607 Pkinase 9.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00607 - - gmx:100797726 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00607 05 5013263 5016439 Tsu05g00607 05 5013263 5016439 ECH