Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00600 ATGGCATCGAAGTCTCCGCCTCCACCTTCCCCGTCTTCTTCTTCTAGATCCAACCCTCTTCTTGATTCCTCCACAAAGAAATTGGAAGACGCAAATCCTGCAGTACAAGATGTGTTATCTGTTATCGAATCTTTGAAGAAACAAGTTGCTGCGAAACGAGTTGTTACTGTTAAGAATAGAGTGGAGGAAAATAGACAGAAGCTGATTGGTATCACGAATCAGTTATGGAATTCGTCGGAAGAGAGAAGGACATGTGGCATTGCTGATGGTGGTAATAGAAGTCTGGATTTGTTGTCTAAGAGGCAAAAAGAAGCAATTGATACGCTCAATGGTGTTTGTGATGAGGATAGGGATAGCAATGGCGATGATGGAGATGACCATGGTTCTACGGCAGTTCTTTTAGGGTCTAATGTTGCTGTAAAGAACGCTGTTCGGCCTATCAAATTACCTGAAGTGAAAAGATTGCCTCCTTACACTACATGGATTTTTTTGGACAGAAATCAAAGAATGACAGAGGATCAGTCAGTTGTAGGTCGGAGGCGAATTTATTATGATCAAACTGGTGGCGAAGCACTTATTTGCAGTGACAGTGAGGAGGAACTAATTGACGAAGAAGAGGACAAAAGAGAGTTTGTAGAACCAGAAGATTTTATACTTCGCATGACTATCAAAGAATATGGTTTATCTGATGCTGTTTTGGAGTCACTGGCTCAGTGTTTTTCTAGAAAAACTAGTGACATTAAGGCCAGATATGAAACTTTTTGCAATGAAGACAATGCTGGCGAGGATTCTAAAAATGGAGATACACAAGATAATTTCCAAATTGGCAATTCTTTTCTGGAAAAGGATCTTGAAGCGGCTCTTGACTCTTTTGACAACCTCTTTTGCCGCCGATGTCGTGTTTTCGATTGCAGATTACATGGATGCTCTCAGGATCTTGTCTTTCCGGCTGAGAGACAACCTTCGTGGAGTCCTCCTAATACTGAAAATGCACCATGTGGGCCAAATTGTTTCCGATCGGCACTCAAGGCAGAAAAGATTGCCAAAGGCGCATCTTCTACTCAGACCGATGTTGAAGACAAATCCTCTGGAAGTACTCTATCTAGGAAAAAATCTTCTGGAAGAAGGCGGATAAAATGCACTCAAAGTGAAAATGCGTCATCTAATGCTAGGAACATATCTGAGAGTAGTGACTCAGAGAATGGTCCTGGACGGGATGCTGTTTCAGCCTCCCACTCCGCCCCACCTAAAACTAAACTAGTGGGGAAAAGTGGAATTGGCAAGAGAAACAGTAAGCGAGTGGCAGAGCGTGTTCTAGTTTGCATGCAGAAACGGCAGAAGAAAACAGCAGCTTCTGATTCTGATTCCATTAGTGAAGTACCGGACCGCTCATCGAATGATATGGTTACTGACTCACATGTCATGATTGGGGAAGACAACATGAGGAAAGAAGAGTTTGTGGATGAAAACATTTGTAAACAAGAATTGACAGATAATAAATCTTGGAAAGCTCTTGAAAAAGGGCTTTTAGAAAAAGGAATGGAAATTTTTGGCAAAAATAGCTGCTTAATAGCTAGGAATCTCTTAAATGGTCTAAAGACGTGTCGGGATGTTTTCCAGTACATAAATTGTGAAGAAGGGAAGTTATCTGGTTCTACTGGGGATGCCACTAATTCTCTTGTAGAAGGCTATTCTAAGGGTAATAATGAAGTGAGAAGAAGATCAAAATTTTTACGAAGAAGAGGAAGAGTCCGTCGTTTAAAGTATACCTGGAAATCTGCCGCTTATCATTCAATCAGGAAAAGGATTACAGAGAGAAAGGACCAGCCCTGCCGACAGTACAATCCGTGTGGATGTCAGTCAGCTTGTGGAAAGGAGTGTCCTTGTCTTTTAAATGGAACCTGCTGTGAGAAGTACTGTGGATGCCCCAAGAGTTGTAAAAATCGATTTCGTGGGTGTCATTGTGCGAAGAGTCAATGCAGAAGTCGTCAATGTCCATGTTTTGCTGCAGATAGGGAATGCGATCCAGATGTTTGTAGGAACTGTTGGGTCAGCAGCTGCGGCGATGGCACTCTTGGCATTCCTAGTCAAAGAGGGGATAATTATGAATGTAGAAATATGAAGCTTCTTCTCAAACAGCAGCAAAAGGTTCTTCTTGGACGGTCTGATGTGTCTGGCTGGGGGGCCTTCTTAAAGAATAGTGTTGGAAAGCATGAATACCTTGGAGAGTATACTGGGGAGTTAATTTCTCACAGGGAAGCAGATAAGCGAGGAAAGATATATGACCGTGAAAATTCATCTTTTCTCTTTAATCTGAATGATCAGTTTGTTCTTGATGCTTATAGAAAGGGTGATAAATTGAAGTTTGCAAACCACTCTCCTGTTCCAAATTGTTATGCGAAGGTTATTATGGTTGCTGGAGATCATAGGGTAGGAATATTTGCCAAGGAACGGATTAATGCTGGAGAGGAGCTATTTTATGATTACCGCTACGAGCCCGACAGAGCTCCTGCTTGGGCTCGGAAGCCAGAGGCACCTGGATCGAAAAAAGAAGACGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTAGCATAA 2595 0.4235 MASKSPPPPSPSSSSRSNPLLDSSTKKLEDANPAVQDVLSVIESLKKQVAAKRVVTVKNRVEENRQKLIGITNQLWNSSEERRTCGIADGGNRSLDLLSKRQKEAIDTLNGVCDEDRDSNGDDGDDHGSTAVLLGSNVAVKNAVRPIKLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQTGGEALICSDSEEELIDEEEDKREFVEPEDFILRMTIKEYGLSDAVLESLAQCFSRKTSDIKARYETFCNEDNAGEDSKNGDTQDNFQIGNSFLEKDLEAALDSFDNLFCRRCRVFDCRLHGCSQDLVFPAERQPSWSPPNTENAPCGPNCFRSALKAEKIAKGASSTQTDVEDKSSGSTLSRKKSSGRRRIKCTQSENASSNARNISESSDSENGPGRDAVSASHSAPPKTKLVGKSGIGKRNSKRVAERVLVCMQKRQKKTAASDSDSISEVPDRSSNDMVTDSHVMIGEDNMRKEEFVDENICKQELTDNKSWKALEKGLLEKGMEIFGKNSCLIARNLLNGLKTCRDVFQYINCEEGKLSGSTGDATNSLVEGYSKGNNEVRRRSKFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKECPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSSCGDGTLGIPSQRGDNYECRNMKLLLKQQQKVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPVPNCYAKVIMVAGDHRVGIFAKERINAGEELFYDYRYEPDRAPAWARKPEAPGSKKEDGAPSSGRAKKLA 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00600 864 CDD SET_EZH 715 831 - -
Tsu05g00600 864 MobiDBLite consensus disorder prediction 348 430 - -
Tsu05g00600 864 ProSiteProfiles SET domain profile. 715 830 IPR001214 GO:0005515
Tsu05g00600 864 MobiDBLite consensus disorder prediction 379 406 - -
Tsu05g00600 864 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 470 862 - -
Tsu05g00600 864 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 19 458 - -
Tsu05g00600 864 SMART CXC_2 648 685 IPR033467 -
Tsu05g00600 864 ProSiteProfiles CXC domain profile. 600 700 IPR026489 -
Tsu05g00600 864 SUPERFAMILY SET domain 588 835 IPR046341 -
Tsu05g00600 864 Pfam SET domain 726 829 IPR001214 GO:0005515
Tsu05g00600 864 MobiDBLite consensus disorder prediction 838 864 - -
Tsu05g00600 864 SMART set_7 715 836 IPR001214 GO:0005515
Tsu05g00600 864 MobiDBLite consensus disorder prediction 838 857 - -
Tsu05g00600 864 MobiDBLite consensus disorder prediction 444 468 - -
Tsu05g00600 864 MobiDBLite consensus disorder prediction 1 32 - -
Tsu05g00600 864 Gene3D SET domain 614 832 IPR046341 -
Tsu05g00600 864 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 470 862 IPR045318 GO:0006338|GO:0018024
Tsu05g00600 864 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 19 458 IPR045318 GO:0006338|GO:0018024
Tsu05g00600 864 MobiDBLite consensus disorder prediction 453 468 - -
Tsu05g00600 864 Pfam CXC domain 652 683 IPR041355 -
Tsu05g00600 864 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 864 IPR025778 GO:0031519
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00600 Tsu-Chr5 4961583 4971416 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00600 704 833 C2H2 Transcription Factor Family AT2G23740 27.891 9.87e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tsu05g00600 SET 2.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00600 - K11430 gmx:100809840 1431.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00600 05 4961583 4971416 Tsu05g00600 05 4961583 4971416 ECH