Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00577 ATGTTTCCTCTCTATCTCCTACTTATCTCTATCCTTTTCCTTATCATCACTTTGAAACTCTTCATCCACACAACAAGAACCTTCAAAAATCTTCCACCTGGCCCACAATGTCTTCCTATAATAGGAAACCTTCATCAACTCAAACAACCACTCCACCGTACTTTCCACACCTTGTCACAAAAACACGGGAAACTATTTTCtctttggttcggttctcgtctagttgttgttgtttcatCTTTAAAAATAGCACAAGAATGTTTCACCAAAAACGACATTGTGTTAGCAAACCGACCTCATTTTTTAACTGGAAAATATATTGGTTACAACAACACCACGGTGGCACAATCACCTTATGGTGATCATTGGCGCAATTTGCGCCGTATATTATCAATTGAAGTTCTCTCATCTCACCGTTTGAATTCCTTTGTAGAAATTCGAACGGACGAGATTATGAGACTAATACAAAAACTAGCAAAAATGTCATGCAATGATTTTTCCGAAGTGGAACTTAAACCTATGTTTTCAGAAATGACATTTAATACTATAATGAGAATGGTGTCTGGGAAAAGATACTACGGGAATGATTGCGATGTCACTCATGTTGAGCAAGCAAGGTTGTTTAGAGAGATAATTAAAGAAATTGTTACTTTAGGAGGAGCTAACAACGTTGGTGATTTTTTGGGATTTTTAAGgtggtttgattttgatggtttGGAAAAGAGGCTTAAGAATATTAGTAAGAGAACTGATTCTTTTTTACAAGGGCTTATTGATGAACATCGTCTTGGAAAGAGGAATACTAATACTATGATTGATCATCTTTTAACTCAGCAACAATCACAACCTGAATATTACACTGATCAAATCATCAAAGGACTTATTGTGGTaaCCGTTGTTTCATCGGCATCAATTGCCGAAGAATGTTTCAACAAAAACGATATTATTTTTGCAAACCGTGTAACCTCCGTCAAAACCAAATATCTTCGTTTCAATAGCACGAACATATTTAACTCATCTTATGGAGACCATTGGCGCAACTTACGTCGTATAAGCTCACTAGAAATACTCTCCACTAATCGTCTTAACTCCTTTTCAGGCATCCGAAAAGACGAGACCATGAGGTTGATTCTAAAACTTTCTGAGAACTCTCATAAAGACTTCAAAAAAGTCAAGCTAAGACCCTTACTTTCGGAACTTGCATTTAACACGATCATGAGAATGGTTTGTGGTAAACGCTTTTATGGAGATGCATCTGATGGAACAACCGCGGATGAGGCAAAGAAATTTCGAGATGTTATAGACGAGATTCAAGAGGTTGGGTTGGGATCACACCTTGGTGATTTTGTGCCATTATTCATGTTGCTTGATTTTAATTATCGTAAGAAGTTAAAAAAGGTTGGAGAGAAGATGGATGCACTTTTTCAAGGACTAGTTGATGATCATCGTAAGAACAAAGAGGAAAATaaagataccatgattgatcaCTTACTTTCTTTACAAGAATCACAACCTGATGATTACAGCGACCAATTTATCAAAGGGCTTATTATGGCATTGATAGTGGCGGGAACAGAAACTTCCTCTATAACACTAGAGTGGGCGATGTCTAATTTGTTAAACCATCCAGAAATATTGGAAAAGGCAAAGATTGAATTGGATAATCACATTGGACAAGAGTGCTTAATTGAGGAAGCTGGAGCTATCAAATTACAATATCTTCAAAATATAATCTCTGAGACTATGCGATTGCACCCACCGGCAACAATGTTGGTGCCACATTTATCATCTGAAGATTGTGTTGTGGGAGGATTTGATGTGCCACGTAACACCATGTTGATGGTGAATGCATGGGCTATTCATAGGGACCCTGACTTGTGGGCTAACCCGACGAGCTTTAAGCctgagaggtttgaaaatacTAAACAAGCAGATGTGCGTGGCTTCCTTCCTTTTGGAATGGGGAGGAGGGCATGTCCTGGGTCGGGGTTAGGCCTAAGAACTATGGGCTTGACTCTAGGCTCGTTGATTCAATGCTTTGATTGGAAAAGAATTGGCAAGGAAGAAATTAACATGGTCGAAGGACGTGGAACTTTGGTGCCCATGGCCATTCCATTGGAGGTCCAATCCGTAGTTTCATCGGCGTCTATTGCCGAAGAATGTTTCACCAAAAACGACATTATTTTCGCAAACCGTATACACTCTCTCAAAACCAAGTATCTTGGTTTCAATAACACAAATATTGTTACCTCATCTTATGGAGATCATTGGCGTAACCTACGTCGTATAAGCTCAATAGAAATACTCTCCGCTCACCGTCTCAACTCTTTTTCAGAAATCCGTAAAGATGAAACCATGAGGTTAGTTCGAAAACTTGCTAAGAACTCTAATAAAGACTTCAAAAAAGTTGAGCTTAGATCTTTGTTTGCTGAGCTAACATTTAATACAATCATGAGAATGGTTTGTGGTAAACGTTTTTACGGCGATGAATCTGATGGAACAGACGCCGATGAGGCAAAGAAATTTCGAGATGTCATGAATGAGATTCAAGAGTTTGGGTTGGCATCCTATCTTGGTGATTTTGTGCCTTTATTCAGATTGCTTGATTTTAGTGGTTATAAGAATAAGTTAAAAAAGCTTGGAGAGAAGATGGATGCACTTTTTCAAGGCCTAGTTGATGATCATCgtaataataaaaaggaaaataaagataccatgattgatcaCTTACTTTCTTTACAAGAATCACAACCTGATTATTACAGTGACCAAATTATCAAAGGGCTTATTATGgcATTGATAGTTGCTGGAACAGAAACTTCCGCTGTAACGTTAGAGTGGGCGATGGCTAATTTGTTAAACCATCCAGATGTATTGGAAAAGGCAAGGATTGAATTGGACAATCACATTGGACAAGAGTGCTTAATTGAGGAAGAAAAAGCTACCAAATTACATTACcttcaaaatattatctctGAGACTCTACGATTGCATCCACCGGTACCAATGTTGATACCACATGTATCATCTGATGCTTGTATCGTGGGAGGTTATGATGTGCCTCAAAACACCATATTGATGGTTAATGCTTGGGATATTCATAGGGACCCGGATTTGTGGGCTGATCCAACGAGCTTTAAGCCCGAGAGGTTTGAGGATAGTCGGCAAGCAGACATGCACGGTTTTATTCCTTTTAGTATGGGGAGGAGGTCCTGTCCTGGATCGGGATTAGCCCTAAGAACTTTAAGCTTAACTTTGGGCTCGTTGATTCAATGTTTTGAGTGGAAAAGAGTTGACAACGAAGAAGTTAGCATGACTGAAGGACGCGGAACCATAGTGCCAATGGCCATTCCATTGGAGGCCCAATGCAAAGCGCGTCCAATAATCAATAAGATTTTCTCTTAA 3405 0.3744 MFPLYLLLISILFLIITLKLFIHTTRTFKNLPPGPQCLPIIGNLHQLKQPLHRTFHTLSQKHGKLFSLWFGSRLVVVVSSLKIAQECFTKNDIVLANRPHFLTGKYIGYNNTTVAQSPYGDHWRNLRRILSIEVLSSHRLNSFVEIRTDEIMRLIQKLAKMSCNDFSEVELKPMFSEMTFNTIMRMVSGKRYYGNDCDVTHVEQARLFREIIKEIVTLGGANNVGDFLGFLRWFDFDGLEKRLKNISKRTDSFLQGLIDEHRLGKRNTNTMIDHLLTQQQSQPEYYTDQIIKGLIVVTVVSSASIAEECFNKNDIIFANRVTSVKTKYLRFNSTNIFNSSYGDHWRNLRRISSLEILSTNRLNSFSGIRKDETMRLILKLSENSHKDFKKVKLRPLLSELAFNTIMRMVCGKRFYGDASDGTTADEAKKFRDVIDEIQEVGLGSHLGDFVPLFMLLDFNYRKKLKKVGEKMDALFQGLVDDHRKNKEENKDTMIDHLLSLQESQPDDYSDQFIKGLIMALIVAGTETSSITLEWAMSNLLNHPEILEKAKIELDNHIGQECLIEEAGAIKLQYLQNIISETMRLHPPATMLVPHLSSEDCVVGGFDVPRNTMLMVNAWAIHRDPDLWANPTSFKPERFENTKQADVRGFLPFGMGRRACPGSGLGLRTMGLTLGSLIQCFDWKRIGKEEINMVEGRGTLVPMAIPLEVQSVVSSASIAEECFTKNDIIFANRIHSLKTKYLGFNNTNIVTSSYGDHWRNLRRISSIEILSAHRLNSFSEIRKDETMRLVRKLAKNSNKDFKKVELRSLFAELTFNTIMRMVCGKRFYGDESDGTDADEAKKFRDVMNEIQEFGLASYLGDFVPLFRLLDFSGYKNKLKKLGEKMDALFQGLVDDHRNNKKENKDTMIDHLLSLQESQPDYYSDQIIKGLIMALIVAGTETSAVTLEWAMANLLNHPDVLEKARIELDNHIGQECLIEEEKATKLHYLQNIISETLRLHPPVPMLIPHVSSDACIVGGYDVPQNTILMVNAWDIHRDPDLWADPTSFKPERFEDSRQADMHGFIPFSMGRRSCPGSGLALRTLSLTLGSLIQCFEWKRVDNEEVSMTEGRGTIVPMAIPLEAQCKARPIINKIFS 1134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00577 1134 Gene3D Cytochrome P450 24 297 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00577 1134 Gene3D Cytochrome P450 298 709 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00577 1134 PANTHER CYTOCHROME P450 FAMILY PROTEIN 711 1130 - -
Tsu05g00577 1134 PANTHER CYTOCHROME P450 FAMILY PROTEIN 8 298 - -
Tsu05g00577 1134 Pfam Cytochrome P450 296 696 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00577 1134 Pfam Cytochrome P450 32 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00577 1134 Pfam Cytochrome P450 710 1109 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00577 1134 Gene3D Cytochrome P450 710 1127 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00577 1134 PRINTS E-class P450 group I signature 649 659 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00577 1134 PRINTS E-class P450 group I signature 659 682 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00577 1134 PRINTS E-class P450 group I signature 575 593 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00577 1134 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00577 1134 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00577 1134 PRINTS E-class P450 group I signature 616 640 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00577 1134 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 652 661 IPR017972 GO:0005506|GO:0016705
Tsu05g00577 1134 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 1065 1074 IPR017972 GO:0005506|GO:0016705
Tsu05g00577 1134 PANTHER CYTOCHROME P450 FAMILY PROTEIN 295 707 - -
Tsu05g00577 1134 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 298 - -
Tsu05g00577 1134 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 711 1130 - -
Tsu05g00577 1134 SUPERFAMILY Cytochrome P450 711 1126 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00577 1134 PRINTS P450 superfamily signature 1072 1083 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00577 1134 PRINTS P450 superfamily signature 1063 1072 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00577 1134 PRINTS P450 superfamily signature 936 953 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00577 1134 PRINTS P450 superfamily signature 989 1000 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00577 1134 SUPERFAMILY Cytochrome P450 32 297 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00577 1134 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 295 707 - -
Tsu05g00577 1134 SUPERFAMILY Cytochrome P450 294 709 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00577 Tsu-Chr5 4762621 4777651 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00577 296 706 Cytochrome P450 AT4G37340 52.670 4.41e-154 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00577 K13260 - gmx:100804509 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00577 05 4762621 4777651 Tsu05g00577 05 4762621 4777651 ECH