Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00566 ATGGAAACACTTAATAAACCTCTCATTGTAACTCTTTTGGTGATTCTGGTCATGAGTAATGTGTCTCTAACAAGAACAAAGAATAGTGGGAATGAAAAGATTACCTACATAGTACACGTTGCCAAATCCAAAATGCCAACAAGCTTTGATCACCATTCAATTTGGTATGAATCAATTCTTAAGTCAGTATCCGAGTCAGCGGAAATGATATACACCTATAATAATGCAATTAATGGATTCTCGACAAGTTTAACAGTTGAAGAACTTCAGTCATTAAAGAGCCAAATTGGGATTCTCAAGGTGACACCAgataaaaagtataaacttCTGACAACTCGAACACCAGAATTCCTTGGGCTTGATAAAATTGCTAGTACGTTTCCCACAACAAACAAAAGTAGTGATGTAATTGTGGGAATCCTCGACACAGGTGTATGGCCTGAAAGCAAGAGTTTTGATGATACTGGATACGGGCCAATCCCCCACAGTTGgaaaggaaaatgtgaaacaggTACCAATTTCACAATCTCAAATTGTAATAAGAAATTGATTGGTGCAAGGTTTTATTTAAAAGGCTTGGAGGCATCTACAAATTCTATTAATGAAACCATCAATTTTAGATCGCCTCGAGACAACGATGGCCATGGAACCCACACAGCGAGCACAATTGTAGGATCTCCAGTGGAAAACACGAGTCTTTTCGGCTACGCCAGTGGGACTGCACGTGGGATGGCTGTTGGTGCTAGAGTTGCTGTTTATAAGGTTTGTCTCAAAGAAGACTGTAGTGGTTCTGATATATTGGCTGCAATAGATCAAGCCATTGCCGATAACATCAATGTTCTTTCCATGTCTATTGGAGGTCTAGCGGTTGATTACTTTGATGATACCCTCGCAATTGGAGCCTTTGCAGCCATGGAGCATGGGATTCTAGTTTCATGTGCAGTGGGAAATGCTGGTCCTATTTCTTCTAGTGTCACAAATGCAGCACCTTGGATTACCACTGTGGGTGCTGGCACACTTGATCGAGATTTTCCTGCGTATGTCAATctcaaaaatggaaaaaaaatttcaggtGTGTCCCTTTATAAAGGTAGTTTATTGCCTGATACTCTTGTGCCACTCATATATGCAGGAAACGCAAGCAATGATAAAGGAGAAGGTATTGGAAAGTGTCTTTCAGGTAGCTTGGAACCAAACAAAGTATCTGGAAAGATCGTGTTGTGTGATGAAGGGGAAAATCCTAGGACAGAGAAAGGAAATGTAGTAAAATCTGCTGGTGGTTTAGGTATGGTGTTAGCCAACACTAAGATCGATGGAGAACAACCAGTGGCAGATGCCCACATTTTGCCAGCAATTGCTTTGGGCTTCAAAGATGGTGAAGCTATCAAGCAATACTTGTATTCTGATCCAAAACCAATGGGCACAATTGTGTTTCAGGGAACAAAGGTTGGGGTTGAACCATCACCTGTTGTTGCAGGGTTCAGCTCACGAGGCCCCAATCCATTAACCCCACAAATATTGAAGCCTGATTTAATTGCGCCGGGGGTTAACATCTTAGCAGCATATACAAGGAATGCGAGTCCCACAAGTTTGAATTCTGATCCTAGGCGTGTGGATTTCAACATTATCTCAGGAACGTCCATGTCATGCCCTCATGTAAGTGGATTAGCGGCTGTGATCAAGACAGTTCATCCAAAATGGAGTGCAGCTGCTATTCGGTCTGCATTGATGACAACAGCTTATACAACTTACAAGAACAATCAATCATTATTGGATGGTGCTAGCAAAAATCCAGCAACTCCATTTGATTTTGGTGCTGGACATGTCGACCCAATTTCCGCACTAAATCCTGGACTTGTCTATGATTTAATAGTGGATGACTATTTGAGCTTTCTTTGTGCATTGAACTACTCAGCTGCTGATATTGAAATCGTGACAAAGAGAAAGTACACATGTAACCCAAAGAAACAATACAGTGTAACAAACCTTAATTACCCTTCCTTTGTTGTGGTCTTTCAGGCCAGACATGGTATAAAGGAGATTAAATATACGCGGACTCTCACTAACGTGGGTGTGGCAGGAACATACAAGGTATCAGTTAAGTCAGATGACCCATCTGTCAAGATCTCAGTTGAACCAGAAGTGCTAAATTTTAagacaaatgagaaaaaattaTACACGGTTACATTTACGACATCTGTTTCGAAACCAAAAAGCCCACAAAGTTTTGGAAGTTTAAAATGGTCCGATGGAAAAATTGTTGTTAGAAGTCCTATAGCGTTTATGTGGAATTAA 2295 0.3969 METLNKPLIVTLLVILVMSNVSLTRTKNSGNEKITYIVHVAKSKMPTSFDHHSIWYESILKSVSESAEMIYTYNNAINGFSTSLTVEELQSLKSQIGILKVTPDKKYKLLTTRTPEFLGLDKIASTFPTTNKSSDVIVGILDTGVWPESKSFDDTGYGPIPHSWKGKCETGTNFTISNCNKKLIGARFYLKGLEASTNSINETINFRSPRDNDGHGTHTASTIVGSPVENTSLFGYASGTARGMAVGARVAVYKVCLKEDCSGSDILAAIDQAIADNINVLSMSIGGLAVDYFDDTLAIGAFAAMEHGILVSCAVGNAGPISSSVTNAAPWITTVGAGTLDRDFPAYVNLKNGKKISGVSLYKGSLLPDTLVPLIYAGNASNDKGEGIGKCLSGSLEPNKVSGKIVLCDEGENPRTEKGNVVKSAGGLGMVLANTKIDGEQPVADAHILPAIALGFKDGEAIKQYLYSDPKPMGTIVFQGTKVGVEPSPVVAGFSSRGPNPLTPQILKPDLIAPGVNILAAYTRNASPTSLNSDPRRVDFNIISGTSMSCPHVSGLAAVIKTVHPKWSAAAIRSALMTTAYTTYKNNQSLLDGASKNPATPFDFGAGHVDPISALNPGLVYDLIVDDYLSFLCALNYSAADIEIVTKRKYTCNPKKQYSVTNLNYPSFVVVFQARHGIKEIKYTRTLTNVGVAGTYKVSVKSDDPSVKISVEPEVLNFKTNEKKLYTVTFTTSVSKPKSPQSFGSLKWSDGKIVVRSPIAFMWN 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00566 764 Pfam Fibronectin type-III domain 662 760 IPR041469 -
Tsu05g00566 764 Gene3D - 341 484 - -
Tsu05g00566 764 CDD PA_subtilisin_like 347 476 - -
Tsu05g00566 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 110 IPR037045 -
Tsu05g00566 764 SUPERFAMILY Subtilisin-like 109 619 IPR036852 GO:0004252|GO:0006508
Tsu05g00566 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Tsu05g00566 764 Pfam Subtilase family 133 593 IPR000209 GO:0006508|GO:0008236
Tsu05g00566 764 Gene3D Peptidase S8/S53 domain 135 628 IPR036852 GO:0004252|GO:0006508
Tsu05g00566 764 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Tsu05g00566 764 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Tsu05g00566 764 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Tsu05g00566 764 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 23 762 - -
Tsu05g00566 764 Gene3D - 632 762 - -
Tsu05g00566 764 Pfam PA domain 385 462 IPR003137 -
Tsu05g00566 764 CDD Peptidases_S8_3 107 581 IPR034197 -
Tsu05g00566 764 ProSiteProfiles Serine proteases, subtilase domain profile. 117 615 - -
Tsu05g00566 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 762 IPR045051 -
Tsu05g00566 764 Pfam Peptidase inhibitor I9 35 109 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00566 Tsu-Chr5 4628907 4631201 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00566 12 763 Subtilisin-like Serine Gene Family AT5G67360 64.058 0.0 970
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00566 - - gmx:100801866 993.416