Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00565 ATGGAAACACTTAAGAAATCTCTCGTTGTAACTCTTTTTGTGATTCTGGTCATGAGCGATGTGCCTCTAGCAAGAACAGAAAAGAGTGATAATGAGAAAATTACTTATATAGTACATGTTGCAAAATCTCAAATGCCGACAAGCTTCGATCACCATTCGATCTGGTACAAATCAATTCTTAAGTCGGTATCTGAGTCAGCTGAAATGCTATACACCTATAATAAAGCACTTAATGGATTCTCAGCAACTTTGACAGTTGAAGAACTTCAGTCATTAAAGAGCCAAGCTGGGATTCTTAAGGTGACAccagataaaaaatataaacttctCACAACTCGAACACCGGAGTTCCTTGGGCTCGATAAAATTGCAAGTACGTTTCCCACAACAAACAAAAGTAGTGACGTAATTGTGGGAGTCCTTGACACTGGTGTATGGCCTGAAAGCAAAAGCTTCGATGATACCGGATACGGGCCAATCCCGCGCAGTTGGAAAGGGAAATGTGAAACAGGTACCAATTTCACGACCtcaaattgtaataaaaaattgattggtGCCAGGTTCTATACAAAGGGATTTGAGGCATCAATGGGTTTGATGAATGAAATCAACGGGGCTAGATCCCCTCGAGACGATGATGGCCATGGAACCCACACAGCAAGCACAGCTGTAGGATCTCCTGTGGGAAATGCAAATCTTTTTGGCTATGCTAATGGGACTGCACGTGGGATGGCTGTTGGTGCTCGAGTTGCTGCCTATAAGGTTTGTTACAAAGAAGCCTGTAGAGTTTCTGATATATTGGCTGCAATAGATCAGGCCATTACCGATAATGTCAATGTTCTTTCCTTGTCTCTTGGAGGTCAATCAATTGATTACTTTGAGGACAATATCGCAATTGGAGCCTTTGCAGCAATGGAGCATGGGATTCTAGTTTCATGCGCTGCAGGAAATTCAGGTCCTAGGTCTTCAAGTGTCACAAATGTAGCACCTTGGATTACCACTTTCTTTGCCCAAAACTCTCCTGCCATTCATATATGCAGGAATGCAAGCAATGATGAAGAAGGAAGTCCTGGATTATGTCTTCCAGATAGCTTGGATCCAAAAAAAGTTTCTGGAAAGATTGTGATGTGCGACCGTGGAGAGATTTCTAGGACCGAGAAAGGAAATGTAGTAAAATCTGCTGGTGGTTTAGGTATGGTGTTAGCCAATATTGAGACCGATGGAGAACAACCAGTGGCAGATGCTCACATTTTGCCAGCAACAGCCGTGGGATTCAAAGATGGTGaagctataaaaaaatacttattttcTGATCCAAAATCAACGGGAACAATTGTGTTTCAGGGAACCAAAATTGGGGTTGAGCCGTCACCTGTTGTTGCAGAGTTCAGCTCACGAGGCCCCAACTCATTAACCCCACAAATATTGAAGCCTGATTTAATTGCGCCAGGTGTTAACATCTTAGCAGCATATACAAGGAATGCGAGTCCCACAAGTTTAGATTCTGATCCAAGGCGCGTTGATTTCAACATTATCTCAGGAACGTCCATGTCATGCCCTCATGTAAGCGGATTAGCGGCTTTGGTCAAGTCAGTTCATCCAGAGTGGAGCCCAGCTGCTATTCGTTCTGCATTGATGACAACATCTTATGCAAATTACAAGAACAATCAAACATTATTGGACGGTGCTAGCAAAAATCCAGCAACACCATTTGATTTTGGTGCTGGACACGTCAACCCTACTTTTGCACTAAATCCTGGACTTGTCTACGATTTGGCAGTGGATGACTATTTGAGCTTTCTTTGTGCATTAAACTACTCGGCTGCTGATATCGAAATCGTGGCAAGGAGAAAGTACACATGTGATCCAAAGAAACAATATAGTGTAACAGACCTTAATTACCCTTCATTTGCTGTGGTCTTTGAGGGAGGGCATGGTGTAGAGGAGATTAAACATACGCGGACTCTTACCAATGTGGGTGTGGCAGGGACATACAAGGTATTAGTTAAGTCAGATGCACCATTTGTCAAGATCTCGGTTGAACCAGAGGTGTTAAGTTTTAagacaaatgagaaaaaattaTACACAGTTACATTTAGGACATCTGGTTCGAAACCAAGTAGTTCTCACAATTTTGGAAGTTTGGAATGGTCTGATGGAAAAACTGTTGTTAGAAGTCCTATAGCGTTTAGTTGGAAATTACAATGA 2208 0.4112 METLKKSLVVTLFVILVMSDVPLARTEKSDNEKITYIVHVAKSQMPTSFDHHSIWYKSILKSVSESAEMLYTYNKALNGFSATLTVEELQSLKSQAGILKVTPDKKYKLLTTRTPEFLGLDKIASTFPTTNKSSDVIVGVLDTGVWPESKSFDDTGYGPIPRSWKGKCETGTNFTTSNCNKKLIGARFYTKGFEASMGLMNEINGARSPRDDDGHGTHTASTAVGSPVGNANLFGYANGTARGMAVGARVAAYKVCYKEACRVSDILAAIDQAITDNVNVLSLSLGGQSIDYFEDNIAIGAFAAMEHGILVSCAAGNSGPRSSSVTNVAPWITTFFAQNSPAIHICRNASNDEEGSPGLCLPDSLDPKKVSGKIVMCDRGEISRTEKGNVVKSAGGLGMVLANIETDGEQPVADAHILPATAVGFKDGEAIKKYLFSDPKSTGTIVFQGTKIGVEPSPVVAEFSSRGPNSLTPQILKPDLIAPGVNILAAYTRNASPTSLDSDPRRVDFNIISGTSMSCPHVSGLAALVKSVHPEWSPAAIRSALMTTSYANYKNNQTLLDGASKNPATPFDFGAGHVNPTFALNPGLVYDLAVDDYLSFLCALNYSAADIEIVARRKYTCDPKKQYSVTDLNYPSFAVVFEGGHGVEEIKHTRTLTNVGVAGTYKVLVKSDAPFVKISVEPEVLSFKTNEKKLYTVTFRTSGSKPSSSHNFGSLEWSDGKTVVRSPIAFSWKLQ 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00565 735 Pfam Fibronectin type-III domain 631 729 IPR041469 -
Tsu05g00565 735 SUPERFAMILY Subtilisin-like 109 588 IPR036852 GO:0004252|GO:0006508
Tsu05g00565 735 Pfam Subtilase family 133 562 IPR000209 GO:0006508|GO:0008236
Tsu05g00565 735 ProSiteProfiles Serine proteases, subtilase domain profile. 117 584 - -
Tsu05g00565 735 Gene3D Peptidase S8/S53 domain 454 597 IPR036852 GO:0004252|GO:0006508
Tsu05g00565 735 Gene3D Peptidase S8/S53 domain 135 337 IPR036852 GO:0004252|GO:0006508
Tsu05g00565 735 Pfam PA domain 360 431 IPR003137 -
Tsu05g00565 735 Pfam Peptidase inhibitor I9 35 109 IPR010259 -
Tsu05g00565 735 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 352 732 - -
Tsu05g00565 735 ProSitePatterns Serine proteases, subtilase family, serine active site. 514 524 IPR023828 -
Tsu05g00565 735 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 110 IPR037045 -
Tsu05g00565 735 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Tsu05g00565 735 PRINTS Subtilisin serine protease family (S8) signature 513 529 IPR015500 -
Tsu05g00565 735 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Tsu05g00565 735 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 336 IPR045051 -
Tsu05g00565 735 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 23 336 - -
Tsu05g00565 735 Gene3D - 350 453 - -
Tsu05g00565 735 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 352 732 IPR045051 -
Tsu05g00565 735 Gene3D - 601 732 - -
Tsu05g00565 735 CDD PA_subtilisin_like 334 445 - -
Tsu05g00565 735 MobiDBLite consensus disorder prediction 205 224 - -
Tsu05g00565 735 CDD Peptidases_S8_3 107 550 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00565 Tsu-Chr5 4621372 4623671 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00565 12 732 Subtilisin-like Serine Gene Family AT5G67360 61.671 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00565 - - gmx:100815413 934.48