Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00562 ATGTCTCCATTTACTCAAAAGTTTCTCTTGTTGTGTGTTTTGATCTTGCTATTTGGGCACTGTGTTCTAGGAGTACGTGTGAATGTTGCTAACTCTTTAGAAGGTAATTTGGACTTAACCATTCATTGCAAATCTCAAGAGCGTGATCTTGGAGCTCAACTTCTTCATCATGGTGCTAGTTTTGGTTGGAATACTGGATTTAGTATTAGTGAGAGACAATATTATTGTTCCTTTCAATGGAATGATGAGTTGCATCGATATGATATATACTTAGCTGGTAGAGATTCATGTAATCCTACTTGCAATTGGTATATAACGAAATCAGGACCATGTATGGTTCTATCTCCCGGTTCTACTACTTGTCATTCGTGGAATAATTAA 381 0.3648 MSPFTQKFLLLCVLILLFGHCVLGVRVNVANSLEGNLDLTIHCKSQERDLGAQLLHHGASFGWNTGFSISERQYYCSFQWNDELHRYDIYLAGRDSCNPTCNWYITKSGPCMVLSPGSTTCHSWNN 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00562 126 PANTHER - 20 121 IPR010264 -
Tsu05g00562 126 Pfam Plant self-incompatibility protein S1 27 124 IPR010264 -
Tsu05g00562 126 PANTHER LEGUMINOSIN GROUP486 SECRETED PEPTIDE 20 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00562 Tsu-Chr5 4595523 4595903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00562 27 126 Carbohydrate Esterase AT3G16970 33.028 3.65e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00562 - - mtr:MTR_1g058500 127.872