Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00536 ATGCTGAAGCAAGCAAATCGTTTCAATCGGTGGCGAACAATCTCAATCTCTGGGGTTCCACATGATGCAGTACGAGTTTTTATTCGATACTTGTACTCTTCCTGTTACgagaaagaagaaatgaagGAATTTGTCCTACATTTGTTGGTGCTGTCACATGTATATGTGGTCCCTCACTTGAAGCGTGAATGCGAACAGAAGCTAGAAATGGGGTTACTCACCATAGATAATTTAGTTGATGTATTTCAACTTGCATTATTGTGTGATGCTCCGCGGCTCAGTCTCATTTGTCACCGTAAGATAATACAAAACTTCAAAACTGTTTCGGAGTCAGAAGGATGGAAAGCAATGAAGCAGAGCCACCCAGTTCTAGAAAAGGAAGTTCTGGAATCAATGATCGAAGAAGAAAATAGTAAGAAGGAGAGGATcagaaaaatgaatgaaagacaGGTCTATCTGCAACTATACGATGCAATGGAAGCTCTTGTTCACATATGTAGAGATGGTTGTCGAACTATTGGCCCGCATGATAAAGACTTTAAAGAAAACCAACCGTGTAGGTATTCATCCTGCAAAGGGCTAGAATTGCTTGTTCGACATTTTGCTGGTTGCAAGTTGAGAGTCCCAGGAGGTTGTGGTCATTGCAAGAGGATGTGGCAACTGTTGGAGCTGCATTCTCGTCTGTGTGCTGATCCGAATGTCTGTGGAGTTCCTTTGTGCAGGAACTTTAAGCAGAAAATAGAAAAGCAAAgtaaaaaagatgaaattagATGGAAAATATTGGTTGAAAAGATCTTAACAACAAGAGGAATTGGGATTGCATCGTGCTTTCGGACACTATGA 843 0.3891 MLKQANRFNRWRTISISGVPHDAVRVFIRYLYSSCYEKEEMKEFVLHLLVLSHVYVVPHLKRECEQKLEMGLLTIDNLVDVFQLALLCDAPRLSLICHRKIIQNFKTVSESEGWKAMKQSHPVLEKEVLESMIEEENSKKERIRKMNERQVYLQLYDAMEALVHICRDGCRTIGPHDKDFKENQPCRYSSCKGLELLVRHFAGCKLRVPGGCGHCKRMWQLLELHSRLCADPNVCGVPLCRNFKQKIEKQSKKDEIRWKILVEKILTTRGIGIASCFRTL 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00536 280 Gene3D - 74 146 - -
Tsu05g00536 280 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 4 1 278 - -
Tsu05g00536 280 SUPERFAMILY POZ domain 8 68 IPR011333 -
Tsu05g00536 280 ProSiteProfiles Zinc finger TAZ-type profile. 146 243 IPR000197 -
Tsu05g00536 280 Gene3D Potassium Channel Kv1.1; Chain A 1 73 IPR011333 -
Tsu05g00536 280 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 1 278 IPR044513 -
Tsu05g00536 280 SUPERFAMILY TAZ domain 149 249 IPR035898 -
Tsu05g00536 280 Coils Coil 126 149 - -
Tsu05g00536 280 SMART TAZ_2 149 241 IPR000197 -
Tsu05g00536 280 Pfam TAZ zinc finger 157 240 IPR000197 -
Tsu05g00536 280 Gene3D TAZ domain 147 270 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00536 Tsu-Chr5 4376288 4381280 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Tsu05g00536 zf-TAZ 2.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00536 - - lja:Lj2g3v1968190.1 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00536 05 4376288 4381280 Tsu05g00536 05 4376288 4381280 ECH