Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00471 atgGTGTTACTAGATTCACAATGGTTCATTCTAGTAGCAGCTTTGTTAGGAGGATATGCATTTGTATTTGGTTTCATTAGGAGAGTGAATGAATGGTACTATGTTAGTAGGTTGGGAAAATTACATCTCCCACCGGGTGATATGGGTTGGCCTTTCCTTGGTAACATGCCTACCTTCCTCAAAACTTTTAAATCTGATCCTGATTCCTTCATCAATAATCTTATTTCCAGATATGGCAGGACAGGTATGTACAAAACACATTTGTTTGGAAGTCCAAGCATCATAGTATGTACACCAGAAACATGTCGTAAGGTTCTAACAGATGAAGAGAATCTTAAACTTGGTTACCCTTCTTCAACAACGGCACTTACAGGAAAAAGATCATTCCATGGAATCTCAAATAATGAGCACAGACGATTGCGGCGATTAATAACATCTCCTATAAATGGTCATGAAGCATTGTCAAGTTATATTGGTCTTATAGAAGATATTGCTGTGAAACATTTAGAAAAGTTGTCTACAATGAACATGCCAATTGAGTTTCTTAAAGAGATGAGAAAGTTTGCTTTTGAAGTCATTACTATCATCTTCATTTCATCTGATTGTGATCATGTTGATCTTGGTTTGGTTGAGAATTTGTATATTGATTTGAACAAGGGAATGAAGTCACTTTCCATCAATCTTCCTGGATTTGCATTCCATAAAGCACTTAAGGCACGAAAGAAATTGGTGAAGATGTTGCAAACCGTAGTGGACCAAAAGAtgaagaataataataaaagagagaaaaaagataTGATGGATTTATTGATGGAAGTCAAAGATGAAGAAGGTAACATGTTGGAGGATGAAGATATTATAGATTTACTTCTTGTGTTCTTGTTAGCTGGTCATGAAAGCTCTGCTCATGGAATTTTGTGGACTATTATCTACCTCTTGGATCATCCACATGTCCTCCAAAAAGCCAAgAAAGAACAAGAAGAGATCATGGAAATAAGACCTTCCACACAAAAAGGACTTAACATTAAGGAAATTAAGCAAATGGAGTATTTATCAAAGGTTATTGATGAGATGCTGCGTAGAACAACTATATCGTTTGCAAACTTTAGATTGGCAAAAGTTGATGTTAACATCAATGGTTATACTATACCAAAAGGATGGAAAGTACTAGTTTGGAATAGAGGTGTTCACATGGATCCTGAAACTTACTCCAATCCAAAGGAATTTGATCCTTCAAGATGGGAGAATTACAAAGCAAGAGCTGGATCATTCCTTCCCTTTGGATTAGGAAGCAGATTTTGTCCTGGAAGTGAtttagctaaacttgagataacTATTTTTCTCCATCATTTTCTTCTTAATTACAGGATGGAGAGACTTAATCCAGATTCTCCTATTACCTACTTGCCATTGCCAAGACCTACAGACAATTGCCTTGCAAGAATTATAAAAGTAACATAA 1461 0.3484 MVLLDSQWFILVAALLGGYAFVFGFIRRVNEWYYVSRLGKLHLPPGDMGWPFLGNMPTFLKTFKSDPDSFINNLISRYGRTGMYKTHLFGSPSIIVCTPETCRKVLTDEENLKLGYPSSTTALTGKRSFHGISNNEHRRLRRLITSPINGHEALSSYIGLIEDIAVKHLEKLSTMNMPIEFLKEMRKFAFEVITIIFISSDCDHVDLGLVENLYIDLNKGMKSLSINLPGFAFHKALKARKKLVKMLQTVVDQKMKNNNKREKKDMMDLLMEVKDEEGNMLEDEDIIDLLLVFLLAGHESSAHGILWTIIYLLDHPHVLQKAKKEQEEIMEIRPSTQKGLNIKEIKQMEYLSKVIDEMLRRTTISFANFRLAKVDVNINGYTIPKGWKVLVWNRGVHMDPETYSNPKEFDPSRWENYKARAGSFLPFGLGSRFCPGSDLAKLEITIFLHHFLLNYRMERLNPDSPITYLPLPRPTDNCLARIIKVT 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00471 486 Coils Coil 256 276 - -
Tsu05g00471 486 Gene3D Cytochrome P450 35 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00471 486 Pfam Cytochrome P450 44 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00471 486 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00471 486 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00471 486 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00471 486 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00471 486 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00471 486 SUPERFAMILY Cytochrome P450 40 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00471 486 PANTHER CYTOCHROME P450 26 23 463 - -
Tsu05g00471 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Tsu05g00471 486 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00471 486 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00471 486 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00471 486 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00471 486 PANTHER CYTOCHROME P450 88D6 23 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00471 Tsu-Chr5 3662288 3665334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00471 8 485 Cytochrome P450 AT2G32440 56.405 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00471 K04123 - qsu:112005461 684.871