Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00467 ATGGAACCTCTGAGACTATTACTGATCTTAATTACTATTTTGTCCAATGTTCACACTCTAAGGAGTAGTAAACTTCTTGTTCATGAGTACTATAAGGAAAAATGTCCTTTAGCTGAAGATATTGTGAGACATAACATGGCGGTAGCAGTTTTGAAAGATCCGCGTTTAGCAGCGTCGCTACTTCGATTACATTTCCATGATTGTTTTGTTATGgGGTGCGATGCATCGGTACTTTTAGACAGCGTTGAAGGCATGACAAGTGAGAAGCTAGCAGGGCCAAATTTGAACTCTTTGCGTGGATTTGAAGTCATTGATAAGATAAAGTATTTACTTGAAGAGGAATGTCCTCTCACTGTTTCATGTGCTGATATTCTTGCTATGGCTGCTCGTGACGCGGTTGAATTGAGAGGAGGACCAAGATGGGAAGTCTGGCTGGGAAGGAAAGATTCCCTAGAGTCAAGTTTCAGTGGAGCCAACCTGTTCATCCCTGCTCCAAATTCTTCTTTAGAggctttaattaataattttaagcaACAAGGTCTAGATATTGAAGACTTGGTGGTTCTATCAGGTAGCCATACTATAGGAAGGGCAAGATGTGTAAGTTTCAAGCAGAGGATCTATGAAATTAAACAAGAATATCACCATGGCTATGAATATGATCGCTACAAACGATACACAAACTTCAGACGAATCCTACGGTCCATATGTCCTATTACAGGAAGGGACGACAAATTTGCACCACTTGATTTTGAAACACCAAAAAGATTTGATAACCATTACTTCATAAACATTCTTGAAGGAAAAGGATTGTTAGGTTCTGATAATGTTTTGATCAGCCAAGACAACTTGCATGGATGGATTAGGGAGCAGGTTTGGGGTTATGCCTCTAATGAAAAACTTTTCTTTGATTCATTTGCTAAGTCTATGATTAAGATGGGAAATATTAATGTACTTACTGGAGATGAAGGAGAAATAAGAAGGAAttgtagCTGCAGCACCACCACCTTCCTCCTCCTCCTTGGTGGTTGTTCGTCACCATTACTTTCACTTCAACTTCAGCTTCACGGTGAAGTTGATTGTTATCGGCGGAGGGTTGCTGGTGGTGGCATTATTGTTTTTGGCGTGGAGGAGCTACCGCGCCAATTCTGTCGCGGTGGAACTGCCGGTGATGCTTGA 1179 0.4037 MEPLRLLLILITILSNVHTLRSSKLLVHEYYKEKCPLAEDIVRHNMAVAVLKDPRLAASLLRLHFHDCFVMGCDASVLLDSVEGMTSEKLAGPNLNSLRGFEVIDKIKYLLEEECPLTVSCADILAMAARDAVELRGGPRWEVWLGRKDSLESSFSGANLFIPAPNSSLEALINNFKQQGLDIEDLVVLSGSHTIGRARCVSFKQRIYEIKQEYHHGYEYDRYKRYTNFRRILRSICPITGRDDKFAPLDFETPKRFDNHYFINILEGKGLLGSDNVLISQDNLHGWIREQVWGYASNEKLFFDSFAKSMIKMGNINVLTGDEGEIRRNCSCSTTTFLLLLGGCSSPLLSLQLQLHGEVDCYRRRVAGGGIIVFGVEELPRQFCRGGTAGDA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00467 392 Gene3D - 30 331 - -
Tsu05g00467 392 CDD secretory_peroxidase 26 331 IPR033905 GO:0004601|GO:0042744
Tsu05g00467 392 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Tsu05g00467 392 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g00467 392 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g00467 392 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g00467 392 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g00467 392 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g00467 392 Pfam Peroxidase 43 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g00467 392 PANTHER PEROXIDASE 20 5 331 - -
Tsu05g00467 392 ProSiteProfiles Plant heme peroxidase family profile. 25 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g00467 392 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Tsu05g00467 392 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g00467 392 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g00467 392 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g00467 392 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g00467 392 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g00467 392 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g00467 392 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g00467 392 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g00467 392 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g00467 392 SUPERFAMILY Heme-dependent peroxidases 27 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu05g00467 392 PANTHER PEROXIDASE 72-RELATED 5 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g00467 392 Gene3D Peroxidase, domain 2 163 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00467 Tsu-Chr5 3624135 3626416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00467 85 330 Peroxidase AT2G35380 67.073 1.24e-116 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00467 K00430 - gmx:100778051 557.755