Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00442 ATGTGTGTCATCATCTCTACTCTTCTGTGTTTTGCTATCAAGGCTCAAAATCATGGCATCAGTTTAATTGGAAAATTACATCAAGGAATAAATCCTTCTTCATGGAATATGTTGAAATTTCATGGAAGTCACCTTGGTCTAGTCATAAAAACTGGCCTTATCACTGACATTTTGTCACTCACTgAAGGTATTGCAGTAGGAAGGACATTTGCAGCTCTTGGAAACTACAAAGTGGATGGAAATAAGGAAATGATGGCAATTGGGTTTATGAATGTGGTTGGCTCCTCCACTTCCTGCTATGTTACAACAGGTGCTTTCTCTCGTTCAGCTGTCAATAATAATGCAGGAGCGAAAACAGCAGCTTCAAATATAGTAATGTCTGTGACAGTGATGGTGACACTTCTTTTTCTTATGCCGTTGTTCCAATACACACCTAATGTTGTATTGGGTGCAATCATAGTCACAGCAGTGATTGGCCTCATCAATATCCCCGCTGCTTGCCACATTTGGAAGATAGACAAATTCGACTTCCTTGTGATGTTAACTGCTTTCTTGGGTGTTATTTTTATCTCTGTCCAGGAAGGTCTTGCTATTGCAGTTGGATTATCAACTTTTAGGATACTCCTGCAAATTACAAGGCCGAAAACAGTAATGATGGGGAATATACCAGGGACAGATATATACAGAAATCTTCATCAATACAAGGACGCAATAAGAATACCAGGCTTTCTTATTTTAAGCATCGAGGCTCCAATCAATTTTGCAAACATCACATATCTTAATGACAGAACATTACGAtggattgaagaggaagaagaagataacaTAAAGGAACAATCAAGTCTTCGATTTTTAATCCTAGATATGTCAGCTGTGAGCGCCATTGACACAAGCGGAATCTCACTTTTCAAGGAGTTAAAGGCAACAATGGAAAAGAAGGGTGTTGAGCTTGTGTTGGTTAATCCTCTCGCCGAGGTCATTGAAAAGCTGAAAAAAGCAGATGAATCTAATACTTTCATACGAGCAGACAACCTTTTCTTGACAGTTGGAGAGGCTGTGGCGTCACTTTCATCAACAATGAAGAGCCAATCAACCACGACAGAAGAAGCACATACAATCGTTCCACATTACTGA 1134 0.3854 MCVIISTLLCFAIKAQNHGISLIGKLHQGINPSSWNMLKFHGSHLGLVIKTGLITDILSLTEGIAVGRTFAALGNYKVDGNKEMMAIGFMNVVGSSTSCYVTTGAFSRSAVNNNAGAKTAASNIVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLINIPAACHIWKIDKFDFLVMLTAFLGVIFISVQEGLAIAVGLSTFRILLQITRPKTVMMGNIPGTDIYRNLHQYKDAIRIPGFLILSIEAPINFANITYLNDRTLRWIEEEEEDNIKEQSSLRFLILDMSAVSAIDTSGISLFKELKATMEKKGVELVLVNPLAEVIEKLKKADESNTFIRADNLFLTVGEAVASLSSTMKSQSTTTEEAHTIVPHY 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00442 377 CDD STAS_SulP_like_sulfate_transporter 234 334 - -
Tsu05g00442 377 Gene3D STAS domain 213 359 IPR036513 -
Tsu05g00442 377 PANTHER SULFATE TRANSPORTER 2 358 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tsu05g00442 377 ProSiteProfiles STAS domain profile. 233 356 IPR002645 -
Tsu05g00442 377 PANTHER BNAA09G30120D PROTEIN 2 358 IPR030313 -
Tsu05g00442 377 Pfam Sulfate permease family 2 182 IPR011547 GO:0016021
Tsu05g00442 377 Pfam STAS domain 234 352 IPR002645 -
Tsu05g00442 377 SUPERFAMILY SpoIIaa-like 239 356 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00442 Tsu-Chr5 3345649 3348224 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00442 1 357 Inorganic Solute Cotransporters AT1G23090 76.536 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00442 K17471 - gmx:100787284 645.966