Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00431 ATGGAGGAGCAACGTTACGAGGTAATGCATGAGCTTGGTTCTGGCAATTTTGCTGTGACTAAGTTGGCCAAAAACATCAAAACTGGAGAACTTGTCGCTATCAAGTACATTCAAAGAGGAGATAAgATTGGTAAGAATGTTGAAAGGGAGATAATTAATCATAGATTTTTAAGTCATCCACATATCATCAACTTCAAAGAGGTATTTGTGACACCAACACATTTAGCAATTGTACTTGAGTATGCTGCTGGTGGTCCACTTTTTGATAGGATGTGCTCTTCTTACCGATTTAGTGAAGATGAGGCAAGATATTTCTTTCAACAGCTAATATCTGGAGTATACTACCTTCATTCCATGCAAATTTCTCATAGAGATTTGAAATTGGAGAACACTCTATTGGATGGAAGTCCAGCTCCTCGTCTCAAAATTTGTGACTTTGGTTTCTCTAAgTCTGTGCACTCTCGACCCAAATCGTTGGTTGGAACTCCTGCATACATTGCACCTGAGATTTTGTCTAGAAAGGAGTATGATGGAAAGCCTGCAGATGTTTGGTCATGTGGTGTTATTCTTTATGTCATGTTATTTGGAGCATACCCATTTCAAGATCCAAAAGATCCTAAAAATTTCTCAAAGATTGTTAAGAAAATAATGGCTGTTCAATACTCCATACCTGGCTATGCATGTATATCTGCAGACTGTAGGCAACTCCTCTCTAGGATTTTTGTTGCCAATCCAGCTAAGAGGATCACGATCTCAGAGATACAACAGCACTCTTGGTTTACGCGGTACATGCCTATAAAAATTGATGAGACTGGTAGAAAATGTTaccaagaaacaaaaaatgatgaattacCTAGGCAACAAAGTGTAGAAGAAATTATGGAGCTTATACAAGAAGCTAGAACTACACCTAGGCCAGATTCATATGATGATGTTGCTGATGTTGATGAGAATGTTGAAGAGAAAGTTGAACTTGTGTGA 981 0.3731 MEEQRYEVMHELGSGNFAVTKLAKNIKTGELVAIKYIQRGDKIGKNVEREIINHRFLSHPHIINFKEVFVTPTHLAIVLEYAAGGPLFDRMCSSYRFSEDEARYFFQQLISGVYYLHSMQISHRDLKLENTLLDGSPAPRLKICDFGFSKSVHSRPKSLVGTPAYIAPEILSRKEYDGKPADVWSCGVILYVMLFGAYPFQDPKDPKNFSKIVKKIMAVQYSIPGYACISADCRQLLSRIFVANPAKRITISEIQQHSWFTRYMPIKIDETGRKCYQETKNDELPRQQSVEEIMELIQEARTTPRPDSYDDVADVDENVEEKVELV 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00431 326 SUPERFAMILY Protein kinase-like (PK-like) 4 283 IPR011009 -
Tsu05g00431 326 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Tsu05g00431 326 Gene3D Transferase(Phosphotransferase) domain 1 82 267 - -
Tsu05g00431 326 MobiDBLite consensus disorder prediction 301 326 - -
Tsu05g00431 326 Pfam Protein kinase domain 6 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00431 326 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
Tsu05g00431 326 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Tsu05g00431 326 SMART serkin_6 6 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00431 326 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 4 305 - -
Tsu05g00431 326 ProSiteProfiles Protein kinase domain profile. 6 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00431 326 PANTHER SERINE/THREONINE KINASE 4 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00431 Tsu-Chr5 3248717 3258579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00431 5 268 CBL-interacting serine-threonine protein kinases AT4G24400 43.015 1.43e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Tsu05g00431 Pkinase 2.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00431 K14498 - gmx:547797 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00431 05 3248717 3258579 Tsu05g00431 05 3248717 3258579 ECH
Tsu05g00431 05 3248717 3258579 Tsu04g02304 04 25700048 25703038 PCT