Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00425 ATGGGTAAACATGGACCTTGCCATCACTGTGGAGTTACAAGCACACCACTTTGGCGCAACGGACCACCAGATAAGCCAATACTATGCAATGCATGTGGTTCTCGGTGGAGGACAAAGGGAACACTTGCGAATTATACGCCTTTACATGCTCGGGCTGAAactgatgattttgatgatcaAAGGGTTTCCAGGGTAAAGAGCATATCGTTAAATAAGAACAAAGAAGTGAAATCGCTCAAACGGAAGCAGAACCGTGATAATGTGGCATCTGGTGGGTTTGCATATGATTACAACCAGGGATTCCAAAAGACTGTTGACGAAGATATAAGCAATCGATCAAGTTCGGGATCAGCCTTGTCTAACTCAGAAAGTTGTGCACAATTTGGCGGTACAGATGCTAGTGATCTGACAGGACCTGCTCAGTCAGTGGTCTGGGATACCACGGTGCCTTCGAAAAAGAGGACATGTGTTGGTCGTGCAAAGCCTTCTTCTGTTGAGAAGCTCACAAAAGATTTATGCACGATTCTTCACGAACAACAATCTTATTTTTCTGCATCTTCTGAAGAAGATCTTCTTTACGAAAGTGAAGCACCAATGGTTTCTGTTGAGATAGGACACGGAAGTGTTCTCATTCGGCATCCTAGCTATGTAGCTCGTGATGAAGAGTCTGAGGCTAGCTCTCTTTCATTTGATAATAGACAATATCTGATGAGTGAGGCATATTCTTATTCTGGTGCCGTTCTTACGCATAATGGTTCCAGTCGCACGAACTTCTCATCTCAGGTAGCTGAAAAGGCCAGAAACTCGGCTGTCCAGGGAATGAAGCAGGAGCAAGTTAAAAGTGACAAGTCTCAGATTGAAAGAGTACAAATCCTTGGAAGTCATGATTCACCACTGTGCTTAATAGATTTAAATGATGTGGTAAACTATGAAGAGTTTTTGAGGAACTTGTCAAATGAAGAGCAGCAGCAATTGTTGAAGTTTCTTCCTGCGGTTGATGCTGCTAAACTTCCTGATAGCCTTAATGTCATGTTCGATAGCTCTCAATTCAAGGAGAACTTAACTTATTTTCAGCAGCTTCTTGTGGAAGGTGTCTTTGATATCTCTTTGTCGGGGGCAAAACCTGAAGACTGCAAAACATTGAAAAGATATGCACTTTCTAATTTGTCAAAGTCAAAATGGGTGGAACACCATCATTTTCTCAAGAGATGTAAAAATAGAGCTGAAAAATCTGATACTCCGGGATCTACAGCATCGGCCAATGTTGCAAACACAAAGAGAAAGCGTGATAGCAGAATTCAGAACTTTTCAGAGGTGAAGACAATAATGAGGAGCCCCAAAAGAATGATCACAAAGACTAATTATGAGGGAAAACTTGGAGATGATGGCACTTGCTATAATCCAAAAAGCCTATTTCCTTTGCCTCCCGATGCTAGCTCATACTTGCTAGATTCTTTTAACTTTACCGAGGAGAGTTCTGATCAGGATTTGCTGCTAGACGTGCCGTCTAATAATTCTTTTCCACAGGCAGAACTCTTGCACCCAAATTTAAGCTATGGTGCTCAAGCCAGCACTAGTAGTAGCTCAGCATACTCACATCTTAATCCAAATTTTCAGACTCTCCTACTCCACTCAACTCGCCGGAAACCGCCGCCTCTGTTCGCCGGAGAAACTCGTCCAGattttattCTCTATCTTCCATATGTTGCGACTGCGACCGCCACCACCACTCGCCGGAGCTACGCCTGCCACCACCACCACTTGCTGATTCATCTCTCTTTGCAAATTTTGGGATCTCTGCAGAACATGACATTGATGGAAAACGGAGGCTCTAGTGTGCTTGCTCGGCCCAAGATTAAGCGCCGTGCAGTTTCTGCAGTTCGTGATTTTCCAGAAGAATGTGGACCATTTGGTTCTGCTGATGGTACATCTGTTGAGGATAAGAGTGAAGAATGTTTAGGCGGTGAAGCTTTTAGTCCAAACCTTGAAGATGAGTCTCAACATTCTGAGGTTGATAAGAATTTGTTTGATACAAAGACTcttgagcaaacaagtgactgTAGTTTGAAGAAGGAAGAGCTTGTTGTTTTATCTGATCAAGTGGATGGGGATACTTTGGCTAACGACGAGGCTGCAAAAGTAGCATTGGTGGACATGGAAACTTCGGATATGGAATTTGCAACTGAAGTGAAAAAGGAAGATCATATGGTCTCATCTCATCAAGGGGATGAGGATACTTTGGCTAACGAGGAGGCCGCAAAAGTTGCATTGGTGGGCATGGAAACTTCGGATATGGAATTTGCAACTGAAGTGAAAAAGGAAGATCATATGGTCTCATCTCATCAAGGGGATGGGGATACTTTGGCTAGTAATGAACCTGCAAACGTGTCATTGGTGGACACGGAAACTGGAGATATGGAACTTGCAACTGAAGTGAAAAAGGAAGACCAGGTCTCATCTCATCAAGTCGATCAGCCTACATTTGATAATGACGAACAAGCAAATGTGGCATTGGCGGACATGGAAACTTTGGATGCAGAATTTGCAACTGAAAGCTGTAGTCCGAAGAAGGAAAATCCTATGGATGAGTCTACTTTGGCTAATGATGAACCTGCTAAAATGGCATTGGTGGGCACGGAAACTTTGGATACTGAATTTGCAACAGATGACTCCGCAAAACAAGATTTCTGTAATATACCGTCTCAATTTGGTGAGGTAGCTATGTATGATATAGGTGGTTCTGGTGCTCGTATGGAGGAGGCTGTAACTAAAAGGTATCCTCCTCGTAGACAAGTTGCAGCAGCGATCAGAGATTTTCCACGTTTATGTGGACGCAATGCTCCTCTTCTTACTACGGACGAGTGTTTAAGGGAGCTCTCTTCTTTGAATCAAAAGAGAGTGGGTCAAACTACCGCAAAAGAATTGGATAATAACAAGAGAAAGCTTGCTAACATCGTTCAAGCTGACTCTGAAGGGAATGCTACACAGAGAGTTAAGAAGATGGAACTAGTTGAACCATCTTCTGAGATGAGATTGGCAGTGGTTAAAGAGGAAAACACTGTACAGGTTGAGGGAACAACAGGCAGGAAAACAGTGCTAGGTTTGATGTCCAAATCAGAATGTCCTTGGAGATCTGATATTAGTTCCTCCAAATTTATACCAGCGTCAATAGGTGGCACAGATGAAAGGAAGGGAAAGAAAGTTGATTATTATGCCCAGCTAGACAGGTCTAAAACTGCTGTCAAGACGAAACATGCCCCGAATCATTCTGGGCATGTGcagttgaaaaagaaaaatggaaatgCTACTTCTGATGACATGGGTGAATTCGTAAGACGGGAGAATAATTCTCTAGACCCTAAACATAAAAACTTTAAAAGCGTCGCAAAATCACATGGTGTAAATGTTCCTCCTCTTGGTCGTAGTAATTTCAGCGGTCATGAGAATGACTCAATGGCCCGGAATAAAGTGAGGAATGCATTGCGCCTGTTCCAAGCTGTTTCTAGGAAACTTTTGCAGGAAGCGGAAGCAAAAGCAAAGTCAAATGAGAAAGAAAGGAGGAGGTTTGATTTACAAGCTGCGAAAATACTTAAGGAGAAAGGGAGCTATGTTAACGAAGGGGATAAGATCTTGGGATCTGTCCCCGGAGTTGAAGTCGGTGATGAATTTCAATACAGAATAGAGCTTAATATAATTGGTCTTCATCGCCAGATTCAGGGTGGTATAGATTATATGAAGCACAAAAATAAAGTCCTTGCAACTAGTATTGTTGCGTCAGGGGGCTATTCTGATGAATTAGATAATACAGATGTTTTGATATATACTGGGCAGGGTGGAAATGTGATGACCAGTGATAAAGACCCAGAAGATCAGAAGCTTGAAAGGGGCAATCTTGCTTTGAAGAACAGCAGTGAGGAAAAGAATCCTGTTAGGGTGATACGGGGTTCGGAATCATCGGATGGAAAAAGCAGGATATATGTTTATGATGGACTTTATCTAGTTGAGTCATATTGGCAGGAAATGGGGTCACATGGGAAGCTGGTTTATAAGTTTCGCTTGCGAAGAATCTCAGGTCAACGAGAGCTTGCCTTGAAGGAACTGAAGAAATCTAAAAAGTTCAAAATAAGAGAAGGTCAGTGCGTCAAAGATATTTCCTACGGTAAAGAGAGAATTCCCATATGTGCTGTGAACACCATAGATGACGAGAAGCCCCCTCCATTTAAATACATAACTAAGATGATATATCCTGATTGTTGCAATCTTGTCCCTCCAGAAGGCTGTGGTTGTACTAATGGATGCTCTGACCACGCAAAATGTTCCTGTGTACTAAAAAATGGGGGGGAAATCCCATTTAATCATAATGGGGCTATTGTAGAAGCAAAGTCTGTAGTCTATGAGTGTGGGCCTAAATGCAAGTGCCCTCCAACCTGCCATAACAGGGTCAGCCAACTTGGCATAAATATTCAACTCGAAATTTTTAAAACCAATTCAATGGGATGGGGTGTAAGATCCCTAAATTCCATTCCTTCAGGAAGTTTTATCTGCGAATATATAGGAGAGGTTCTTGAAGACAAGGAAGCTGAACAAAGAACTGGTAATGATGAGTATCTTTTTGATATTGGAAATAACAAAACCAACAATACTCTTTGGGATGGACTTTCGACACTTATACCTGATTCACACTCAAGTTCACATGAAGTAGTGAATGATGTTGGCTTCACTATCGATGCCGCCCAGTTTGGTAATGTGGGGAGATTCATCAACCACAGTTGCTCCCCTAATCTCTATGCTCAGAATGTCCTTTATGATCATCATGACATCAGGATTCCTCACGTCATGTTATTTGCTGCTGAGAACATTCCTCCCTTGCAAGAGCTGAGTTATGATTACAATTATATGATAGATCAAGTTCGTGATTCTGATGgcaatataaaaaagaagtactGCTATTGTGGTTCTGTGGAATGTACTGGTTTCCTCCTCCGGAGGTAA 4992 0.4169 MGKHGPCHHCGVTSTPLWRNGPPDKPILCNACGSRWRTKGTLANYTPLHARAETDDFDDQRVSRVKSISLNKNKEVKSLKRKQNRDNVASGGFAYDYNQGFQKTVDEDISNRSSSGSALSNSESCAQFGGTDASDLTGPAQSVVWDTTVPSKKRTCVGRAKPSSVEKLTKDLCTILHEQQSYFSASSEEDLLYESEAPMVSVEIGHGSVLIRHPSYVARDEESEASSLSFDNRQYLMSEAYSYSGAVLTHNGSSRTNFSSQVAEKARNSAVQGMKQEQVKSDKSQIERVQILGSHDSPLCLIDLNDVVNYEEFLRNLSNEEQQQLLKFLPAVDAAKLPDSLNVMFDSSQFKENLTYFQQLLVEGVFDISLSGAKPEDCKTLKRYALSNLSKSKWVEHHHFLKRCKNRAEKSDTPGSTASANVANTKRKRDSRIQNFSEVKTIMRSPKRMITKTNYEGKLGDDGTCYNPKSLFPLPPDASSYLLDSFNFTEESSDQDLLLDVPSNNSFPQAELLHPNLSYGAQASTSSSSAYSHLNPNFQTLLLHSTRRKPPPLFAGETRPDFILYLPYVATATATTTRRSYACHHHHLLIHLSLQILGSLQNMTLMENGGSSVLARPKIKRRAVSAVRDFPEECGPFGSADGTSVEDKSEECLGGEAFSPNLEDESQHSEVDKNLFDTKTLEQTSDCSLKKEELVVLSDQVDGDTLANDEAAKVALVDMETSDMEFATEVKKEDHMVSSHQGDEDTLANEEAAKVALVGMETSDMEFATEVKKEDHMVSSHQGDGDTLASNEPANVSLVDTETGDMELATEVKKEDQVSSHQVDQPTFDNDEQANVALADMETLDAEFATESCSPKKENPMDESTLANDEPAKMALVGTETLDTEFATDDSAKQDFCNIPSQFGEVAMYDIGGSGARMEEAVTKRYPPRRQVAAAIRDFPRLCGRNAPLLTTDECLRELSSLNQKRVGQTTAKELDNNKRKLANIVQADSEGNATQRVKKMELVEPSSEMRLAVVKEENTVQVEGTTGRKTVLGLMSKSECPWRSDISSSKFIPASIGGTDERKGKKVDYYAQLDRSKTAVKTKHAPNHSGHVQLKKKNGNATSDDMGEFVRRENNSLDPKHKNFKSVAKSHGVNVPPLGRSNFSGHENDSMARNKVRNALRLFQAVSRKLLQEAEAKAKSNEKERRRFDLQAAKILKEKGSYVNEGDKILGSVPGVEVGDEFQYRIELNIIGLHRQIQGGIDYMKHKNKVLATSIVASGGYSDELDNTDVLIYTGQGGNVMTSDKDPEDQKLERGNLALKNSSEEKNPVRVIRGSESSDGKSRIYVYDGLYLVESYWQEMGSHGKLVYKFRLRRISGQRELALKELKKSKKFKIREGQCVKDISYGKERIPICAVNTIDDEKPPPFKYITKMIYPDCCNLVPPEGCGCTNGCSDHAKCSCVLKNGGEIPFNHNGAIVEAKSVVYECGPKCKCPPTCHNRVSQLGINIQLEIFKTNSMGWGVRSLNSIPSGSFICEYIGEVLEDKEAEQRTGNDEYLFDIGNNKTNNTLWDGLSTLIPDSHSSSHEVVNDVGFTIDAAQFGNVGRFINHSCSPNLYAQNVLYDHHDIRIPHVMLFAAENIPPLQELSYDYNYMIDQVRDSDGNIKKKYCYCGSVECTGFLLRR 1663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00425 1663 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 806 1663 IPR025794 GO:0016571
Tsu05g00425 1663 Pfam Asx homology domain 282 367 IPR028020 -
Tsu05g00425 1663 Gene3D SET domain 1376 1661 IPR046341 -
Tsu05g00425 1663 SMART G9a_1 1207 1359 IPR003105 -
Tsu05g00425 1663 Pfam SET domain 1499 1631 IPR001214 GO:0005515
Tsu05g00425 1663 CDD SET_AtSUVH-like 1405 1632 - -
Tsu05g00425 1663 SMART preset_2 1381 1472 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Tsu05g00425 1663 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Tsu05g00425 1663 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 45 - -
Tsu05g00425 1663 ProSiteProfiles YDG domain profile. 1212 1355 IPR003105 -
Tsu05g00425 1663 PANTHER OSJNBB0038F03.10 PROTEIN 1 534 IPR044589 -
Tsu05g00425 1663 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Tsu05g00425 1663 ProSiteProfiles Pre-SET domain profile. 1425 1485 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Tsu05g00425 1663 Gene3D - 1194 1375 IPR036987 -
Tsu05g00425 1663 SUPERFAMILY PUA domain-like 1196 1367 IPR015947 -
Tsu05g00425 1663 SUPERFAMILY SET domain 1371 1632 IPR046341 -
Tsu05g00425 1663 ProSiteProfiles Post-SET domain profile. 1645 1661 IPR003616 -
Tsu05g00425 1663 CDD ZnF_GATA 6 53 IPR000679 GO:0006355|GO:0043565
Tsu05g00425 1663 Pfam SAD/SRA domain 1211 1359 IPR003105 -
Tsu05g00425 1663 SMART GATA_3 1 55 IPR000679 GO:0006355|GO:0043565
Tsu05g00425 1663 MobiDBLite consensus disorder prediction 407 430 - -
Tsu05g00425 1663 MobiDBLite consensus disorder prediction 637 670 - -
Tsu05g00425 1663 Coils Coil 1172 1192 - -
Tsu05g00425 1663 ProSiteProfiles SET domain profile. 1488 1631 IPR001214 GO:0005515
Tsu05g00425 1663 MobiDBLite consensus disorder prediction 1079 1104 - -
Tsu05g00425 1663 Pfam Pre-SET motif 1384 1480 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Tsu05g00425 1663 PANTHER GATA TRANSCRIPTION FACTOR 26 1 534 - -
Tsu05g00425 1663 SMART set_7 1488 1637 IPR001214 GO:0005515
Tsu05g00425 1663 Gene3D - 4 87 IPR013088 GO:0006355|GO:0008270
Tsu05g00425 1663 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 295 406 IPR044867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00425 Tsu-Chr5 3211959 3223010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00425 1 514 C2C2-Gata Transcription Factor Family AT4G17570 53.333 2.92e-151 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tsu05g00425 SAD_SRA 4.5e-51 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00425 K11420 - gmx:100803378 1067.76