Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00408 ATGATGGCTGAAAAGGAAGATTTGGGTTTGAGCCTAAGCTTGAACTTCCCTCAAAATCCACCACCAAACCCTCAATACCTTAATCTTATGTCTTCTTCAACTCATTCATCTTCTCCTTCTATCTACAATCTCCAAAAACCATCTTGGAACAACGATGCTCTCACTTCTTCAGATCGGGATTCGGAAACATGCAGAGGAGGCGAAGAAAGATCGTTACTCCTCCGAGGAATCGATGTGAATCGGTTACCTTCCGGTGCTGATTGTGAAGAAGAAGCAGGAGTTTCATCTCCAAACAGCACGGTTTCGAGTGTGAGTGGTAATAAACGGAGCGAAAGAGAGGTTACTGGTGAAGATCTTGACATGGAAAGAGATTGTTCAAGAGGAATCAGTGATGAAGAAGATGCTGAAACTTCAAGGAAAAAACTTAGACTCACTAAAGACCAATCAATTATTCTTGAAGAGAGTTTCAAGGAACACAATACTCTTAACCCCGTAAgtagtaattaa 507 0.4083 MMAEKEDLGLSLSLNFPQNPPPNPQYLNLMSSSTHSSSPSIYNLQKPSWNNDALTSSDRDSETCRGGEERSLLLRGIDVNRLPSGADCEEEAGVSSPNSTVSSVSGNKRSEREVTGEDLDMERDCSRGISDEEDAETSRKKLRLTKDQSIILEESFKEHNTLNPVSSN 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00408 168 MobiDBLite consensus disorder prediction 1 67 - -
Tsu05g00408 168 Pfam HD-ZIP protein N terminus 2 113 IPR006712 GO:0005634
Tsu05g00408 168 MobiDBLite consensus disorder prediction 110 141 - -
Tsu05g00408 168 PANTHER - 4 164 - -
Tsu05g00408 168 MobiDBLite consensus disorder prediction 83 141 - -
Tsu05g00408 168 MobiDBLite consensus disorder prediction 25 57 - -
Tsu05g00408 168 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 4 164 - -
Tsu05g00408 168 MobiDBLite consensus disorder prediction 93 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00408 Tsu-Chr5 3088143 3090060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00408 1 164 Homeobox Transcription Factor Family AT4G17460 54.545 9.50e-43 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00408 K09338 - gmx:100787231 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00408 05 3088143 3090060 Tsu04g02347 04 26289234 26291291 PCT