Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00390 ATGGGGTTAGTGGAAGATGTGACATTAATTGGAGGGTTAATAGTAGTTCAATTGATATATGCAGGAAATGCTGAATTAATGAGTTATTCAATGTCATTAGGAATTAGCCCTCTTACTATTGTCATATTTACTTCCATTGCTACATTCCTTATTCTCTTCCCTgctgcatttttttttgaaaggAGTAAATGGCCTAAGAATTGCAGTTTAAAGTTTATGATGCAGATATGTTTTCTTTCATTTGGAGGATTAGCTTTCCAGTCTTTATTCCTCAAAGGAATTAGTCTAACATCGGCGGCAATGGGAACAGCAATGCCAAATCTTGCTCCAGGTCTTATCTTCATCATCGCATGGACTGTTggGTTAGAGAAAGTTGACTTGAGAAACAAGTATAGTAAATTAAAAATCTTAGGAACATTATTATGTGTATTGGGAGCTTTCACAATGAGCATAATGCAAAGCCTTTCGGCTCCTGCAACCGAAAAAGAGGctccatcatcatcaacaccatCAGATCTTCTCTTTGACGAGCAAAAGATCATCGGTTGCCTCTATCTAATGATTTCAGTTTTAATATTGTCAAGCAGTGTTGTCCTCCAGGCTTTTGCTCTTGGTGACTTTCCTGCACCAATGTCCTTGAGCGCATTGACATCGTTGTTTGGAGGATTCATGACTGCAGTTGTTCAAGTATTTGAAGGCGAAGAACTTAATACTGGTTTGCAACTTGTGAGCTTTGGAGACTTGATAGGCTTTTCCATTCTGGCTGGTGGAGTGAGTGGAATATCCCTAAGCTTCAATGGATGGGCACTTAAGAAGAGAGGACCAGTCTTTGTCTCCATGTTTAGCCCAATTGGAACAGTATGCTCAGTTATTTTCTCTGTATTTAATCTTGGAAACACTATTAGTATTGGAAGCATTGTTGGTATGTTCCTTATGTTCAGTGGACTCTACATAGTTCTTTGGGCCAAAGGGAAAGAAGGACATGCAGATGATGGAGATTTCATTGAGAAAGCTTGA 1017 0.3727 MGLVEDVTLIGGLIVVQLIYAGNAELMSYSMSLGISPLTIVIFTSIATFLILFPAAFFFERSKWPKNCSLKFMMQICFLSFGGLAFQSLFLKGISLTSAAMGTAMPNLAPGLIFIIAWTVGLEKVDLRNKYSKLKILGTLLCVLGAFTMSIMQSLSAPATEKEAPSSSTPSDLLFDEQKIIGCLYLMISVLILSSSVVLQAFALGDFPAPMSLSALTSLFGGFMTAVVQVFEGEELNTGLQLVSFGDLIGFSILAGGVSGISLSFNGWALKKRGPVFVSMFSPIGTVCSVIFSVFNLGNTISIGSIVGMFLMFSGLYIVLWAKGKEGHADDGDFIEKA 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00390 338 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 325 - -
Tsu05g00390 338 PANTHER WAT1-RELATED PROTEIN 9 337 IPR030184 GO:0016021|GO:0022857
Tsu05g00390 338 PANTHER WAT1-RELATED PROTEIN 9 337 - -
Tsu05g00390 338 Pfam EamA-like transporter family 14 150 IPR000620 GO:0016020|GO:0016021
Tsu05g00390 338 Pfam EamA-like transporter family 181 320 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00390 Tsu-Chr5 2918613 2921414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00390 3 334 Nodulin-like Gene Family AT5G47470 56.587 3.46e-129 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00390 - - aprc:113870214 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00390 05 2918613 2921414 Tsu04g02370 04 26533695 26536862 PCT