Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00366 atGGCTGGTGGTTGGGTGAAATCATTGCAATGCAAATCTAAAGCATATGAAGATGTTTACAACCCAAATACTAAAAACCGATTACAAAGTGCAAGTTGTAGAAAAAGTGTTCAAAACATTAAagatgttgttgttgacacAACAAAACCTAAATCCAAAAAACCGCTTCAAAAACATCATAGTTCAAGATACCCAACAACAGTTTCTACTACAAAAACCGATTTTGAAACTACCATGAACCGTTCCAGAAGTGCAAACTCAACCACCGCCAACCGCCACCTTCCGTCGCCGGACCCACGTTTTTCTTCTCTCACGGAGCTAACAGAAGGTCATCCTTCAAGGAATGTAGTTGAGATTATTTTCCATACGAGTTGGGGTCCGAAAACTTTTTCGGGTCGGgttgaaatgatttttaaaGTTCATAACGGGTCAAGAACGGTTACCCGGTTTGAAGAGTATCGTGAAACGGTGAAAAACCGATCTGGTTCGGTAAACACGAACAATCATGAAGAGAATGCACGGTGCGTTGCTGATGGGAATGAAGTGATGAGGTTTCATTGTTTGGGTCCTACTTCCGGCGGTGGACCCTACGGTGGTGCTTGTGTGGGGTCGTTTCCAGGTGGAAAAGGAACGGCGATCTGCACATTTTCCGGTAGCGGTGGAGCACATGAGAGTTCTGGTGGTGGAAGAGGAAGAAGGGCTATGTTGGTTTGTCGGGTCATAGCGGGTCGGGTTTCGAAACAAGTTGGGTTTATGGACTCGTTGTTGGATGGACGAGTTGGGTTTGACTCGGTGAGTGGTGATAATGGCGAGTTATTGGTTTTTGATTCGCGTGCTGTTTTGCCTTGTTTTCTTATCAtttataaattgtaa 873 0.4273 MAGGWVKSLQCKSKAYEDVYNPNTKNRLQSASCRKSVQNIKDVVVDTTKPKSKKPLQKHHSSRYPTTVSTTKTDFETTMNRSRSANSTTANRHLPSPDPRFSSLTELTEGHPSRNVVEIIFHTSWGPKTFSGRVEMIFKVHNGSRTVTRFEEYRETVKNRSGSVNTNNHEENARCVADGNEVMRFHCLGPTSGGGPYGGACVGSFPGGKGTAICTFSGSGGAHESSGGGRGRRAMLVCRVIAGRVSKQVGFMDSLLDGRVGFDSVSGDNGELLVFDSRAVLPCFLIIYKL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00366 290 MobiDBLite consensus disorder prediction 61 106 - -
Tsu05g00366 290 PANTHER POLY(ADP-RIBOSE) POLYMERASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 2 289 - -
Tsu05g00366 290 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 289 - -
Tsu05g00366 290 SUPERFAMILY ADP-ribosylation 103 289 - -
Tsu05g00366 290 MobiDBLite consensus disorder prediction 46 106 - -
Tsu05g00366 290 Gene3D - 102 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00366 Tsu-Chr5 2734102 2735131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00366 103 289 C2H2 Transcription Factor Family AT5G54630 37.557 7.41e-33 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00366 - - gmx:100804686 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00366 05 2734102 2735131 Tsu05g00366 05 2734102 2735131 ECH