Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00365 ATGTCGGCTTACACAAACCAGGATCCCCGTCTTCACGGCATCAAAACTCAAATTCGTGTCGTCCCTAATTTTCCTAAATCCGGTATCATGTTCCAAGACATTACAACTCTGTTGCTGGATCCCAAAGCTTTTAAGGACACTATTGATTTGTTCGTTGAACGTTATAAGGGCAAAAATATTTCTGTTGTTGcagGAATCGAAGCTCGAGGATTTATTTTTGGTCCTCCCATTGCCCTGGCAATAGGAGCAAAGTTTGTACCCTTAAGGAAACCGAAGAAGTTGCCTGGCAAAGTAATATCTCAAGAATATATTCTGGAATATGGAAGGGATTGTCTAGAGATGCATGTAGGAGCTGTTGAAGCTGGTGAACGTGCTATTGTGGTTGATGATTTGATTGCAACTGGTGGAACACTTGGTGCAGCTATGGATTTACTAGaACGTGTTGGAGCAGAGGTAGTAGAGTGTgcatgtgtcattgaattaccAGAACTTAAGGGTCGTGAACGTTTGAATGGGAAGCCCTTGTACGTGTTGGTGGAATACTTCGATATTTGA 555 0.4054 MSAYTNQDPRLHGIKTQIRVVPNFPKSGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVEAGERAIVVDDLIATGGTLGAAMDLLERVGAEVVECACVIELPELKGRERLNGKPLYVLVEYFDI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00365 184 CDD PRTases_typeI 48 180 IPR000836 -
Tsu05g00365 184 Hamap Adenine phosphoribosyltransferase [apt]. 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Tsu05g00365 184 SUPERFAMILY PRTase-like 12 175 IPR029057 -
Tsu05g00365 184 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 2 180 - -
Tsu05g00365 184 Gene3D - 2 181 IPR029057 -
Tsu05g00365 184 Pfam Phosphoribosyl transferase domain 50 167 IPR000836 -
Tsu05g00365 184 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 3-RELATED 2 180 - -
Tsu05g00365 184 TIGRFAM apt: adenine phosphoribosyltransferase 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00365 Tsu-Chr5 2718096 2724223 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00365 1 180 PRT Gene Family AT1G27450 75.556 2.01e-97 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00365 K00759 - gmx:100306411 347.436