Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00360 ATGAACAATTTCTCACATGTTCCTCCTGGATTTCGTTTCCATCCCACTGATGAAGAACTTGTTGATCACTATCTTAGAAAAAAGATAGCTTCCAAAAGAATTGATCTTGATATCATTAAAGATGTTGATCTCTATAAAATCGAACCATGGGACCTACAAGAATTATGCAAAATAGGAAGTGATGAACAAACAGAATGGTATTTCTTCAGTCATAAAGATAAGAAATATCCAACAAGCAGCCGTACAAATAGAGCTACAAAAGCAGGATTCTGGAAAGCTACAGGAAGAGACAAAGCAATATACTCAAACCATATTTGTTTGATTGGAATGAGAAAGACTCTAGTTTTCTACAAAGGAAGAGCACCTAATGGACAAAAATCTGATTGGATCATGCATGAATATCGTTTAGAAActaatgaaaatggaactaCTCCTCAAGAAGAAGGATGGGCTGTGTGTAAAGTGTTCAAGAAACGAATAGCTTCTACAATGATGAGGAGAATGGACGATTCACCGTGTGGATATGATGATCAAGTATCATTCATGCAatcagagcttgaatcttcTCCAAACAGAATTTCTCATGCATCATACCAACAACATTACCCTTGCAAACAAGAATACTATGATAGATTTCAATACAATATAGCAATTAATGATGCTAATAATTTTCTCCAACTTCCACAACTAGAAAGCCCTAGAGTTCCTAATAATTTTCAGTGTTCATCATCACATTCACTTACTACTCATCAAGAACAACAATATTATAGCCAACAACAAAATATGCAAATGCTTTATGGTGGTGGCAATAGCAATAATGATATTCAAGCTTCTGGAGCAGTAGTGGAGCAATCAAGAGATTGGAGAGTACTTGATAAATTTGTTGCTTCTCAGCTAAGTCATGATCAAGATGCTTCTAAGGAAAGTACTAGTTATTGCAATGTGGCTGAACAAATTGCTTTGCTAGCAAGTGATGACTCAAACAAATCTGAAACAAGCCAAATTGACATGTGGAAGTGA 1020 0.3422 MNNFSHVPPGFRFHPTDEELVDHYLRKKIASKRIDLDIIKDVDLYKIEPWDLQELCKIGSDEQTEWYFFSHKDKKYPTSSRTNRATKAGFWKATGRDKAIYSNHICLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETNENGTTPQEEGWAVCKVFKKRIASTMMRRMDDSPCGYDDQVSFMQSELESSPNRISHASYQQHYPCKQEYYDRFQYNIAINDANNFLQLPQLESPRVPNNFQCSSSHSLTTHQEQQYYSQQQNMQMLYGGGNSNNDIQASGAVVEQSRDWRVLDKFVASQLSHDQDASKESTSYCNVAEQIALLASDDSNKSETSQIDMWK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00360 339 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 329 - -
Tsu05g00360 339 Pfam No apical meristem (NAM) protein 8 136 IPR003441 GO:0003677|GO:0006355
Tsu05g00360 339 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 329 - -
Tsu05g00360 339 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Tsu05g00360 339 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Tsu05g00360 339 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00360 Tsu-Chr5 2685527 2687380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00360 1 339 NAC Transcription Factor Family AT1G12260 56.906 5.45e-123 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu05g00360 NAM 5.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00360 - - zju:107405051 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00360 05 2685527 2687380 Tsu05g00360 05 2685527 2687380 ECH
Tsu05g00360 05 2685527 2687380 Tsu04g02428 04 27371134 27375123 PCT