Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00357 ATGGCAGCTAGAGTGAGGGTTTCTTTACTGGTCCTCATGAGCCTTGTCACTTACATGTCTAGCACCGCAGAATCCTCTGTAACCCCAGCAGAGTTCATCAAGTCTTCGTGCAGGGCTACTCGGTACCCTATTTTATGCGTTCAATGCCTCATGAGGTATTCGAGCGTGATTGGCCTAAGTGAGCGACAACTAGCCATGACTGCTCTATCAGTGAGCATATCAAGGACTCGATCGAGTGCATTATTTGTGAAGAAGTTATCAAAAGCAAGAGGCATCAAACCAAGGGAGTACGGAGCCATACAAGACTGCATAGAAAACATGGGTGACAGTTTGGACAGTCTTAGCCAATCGGTTAGGGAGTTAGGCAGTATTGGTCATGCTGTTGGAGAGGATTTCGTGTGGCACATGAGCAACGTGCAAACTTGGGTCAGTGCTGCCCTTACTGATGATAACACTTGTCTTGATGGCTTTGCTGGTCCTTCCATGAATGGAAATGTTAAGGCTGCCATCAAGAAAAGGGTCGTCAATGTTACTCAAGTTACCAGCAACGCACTCGCTTTGGTCAATCGCTTCGCCTCGATTCATTGA 588 0.4711 MAARVRVSLLVLMSLVTYMSSTAESSVTPAEFIKSSCRATRYPILCVQCLMRYSSVIGLSERQLAMTALSVSISRTRSSALFVKKLSKARGIKPREYGAIQDCIENMGDSLDSLSQSVRELGSIGHAVGEDFVWHMSNVQTWVSAALTDDNTCLDGFAGPSMNGNVKAAIKKRVVNVTQVTSNALALVNRFASIH 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00357 195 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 189 IPR006501 GO:0004857
Tsu05g00357 195 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 192 IPR035513 -
Tsu05g00357 195 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 191 IPR035513 -
Tsu05g00357 195 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 194 - -
Tsu05g00357 195 PANTHER PECTINESTERASE INHIBITOR 9 10 194 - -
Tsu05g00357 195 CDD PMEI-like_3 35 193 - -
Tsu05g00357 195 SMART PMEI_2 28 187 IPR006501 GO:0004857
Tsu05g00357 195 Pfam Plant invertase/pectin methylesterase inhibitor 32 187 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00357 Tsu-Chr5 2664886 2665473 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00357 33 188 Carbohydrate Esterase AT3G14310 32.484 3.24e-24 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00357 - - mtr:MTR_5g012000 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00357 05 2664886 2665473 Tsu05g00357 05 2664886 2665473 ECH