Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00329 ATGAAAACCAACTACACAATGGAGCTTATATTGCTTGTTGGTCTCGTTTTCATTCTCTGCAGCATAAGCCAAATTACATCAGTACTTGCTGCAGAGGATAATCAAGAATTTGATCACAACTTAATGACATACATTGTTCATGTCGAAAAATCAGAACATATCGCTTCATTTCAATTGGAAGATTTGCATAACTGGTACCATTCATTCCTCCCACAAGGTTTTGCTCACAAAGAGAGAATGGTTTTCACTTACCGCAATGTCGCCTCTGGATTTGCCGTGAAGTTGACACCAGAAGAAGCCAAATCTCTTcaagaaaaagatgaaattgTGTCAGCAAGACCTGAAAGGACACTTTCATTACACACAACACACACTCCAACTTTCATGGGGTTAAAACAAGGACAAGGATTGTGGAGAGATGATAACCTCGGAAAAGGTGTAATAATTGGACTCATAGACACAGGAATCTATCCTTTTCATCCATCATTCAACGATGAAGGAATGCCGCCACCACCATCAAAATGGAAAGGCCATTGTGAATTCACTGGAGAAACGACATGCAACAATAAGCTCATAGGTGCAAGAAATTTAGTCAAAGGCGCAATTCAAGAGCCTCCATTTGAAGATATCTTCCATGGAACACACACTTCCGCAGAGGCTGCAGGAAGATTCGTAGAAGATGCAAGTGTTTTTAGTAATGCTAAAGGTGTAGCAGCTGGCATAGCACCACATGCTCACATAGCAATGTACAAAGTTTGTAATGACAAACTAGGATGCCCCGAAAGTGCTATCTTAGCTGCAATGGATATATCTATAGAAGATGGTGTGGATGTTCTTTCACTTTCACTTGGTTTAGGGTCTCTTTCATTTTTTGAAGACCCAATTGCAGTTGGTGCATTTGCTGCTACTCAAAATGGTGTTTTTGTTAGTTGTTCTGCTGCAAACTCTGGCCCTGGATACAACACTCTCTCAAATGAAGCTCCTTGGATCCTCACAGTAGGTGCAAGCACAATTGACAGAAAAATTGTAGCATCAGCAAAACTAGGGACTGGAGATGAATTTGAAGGTGAAACATTATTCCAACCGAAAGACTTTTCTCAACAGTTATTGCCACTTGTGTATGCAGGTTCATATGGAAACAAGACACAAAATCAGTCTTGGTGTCTACCAGGTTCCTTAAAGAACATTGATCTAAGTGGAAAAATAGTGTTGTGTGACATAGGAGGACATGTTACAGGTGATGTGAAAGGACAAGAAGTTCTAAATGCGAATGGTGTAGGAATGATCCTTGCAAACCCAGAAGCACTTGGTTTCACCACTTATGTTCTTGCGAGTGTTTTACCTGCTGTTGAAGTTAGTTATGCAGCTGGTTTAACAAtcaaagattacattaactcaACCTACAATCCAACAGCAACAATACTATTCAAAGGAACAGTAATTGGTGATTCCTTAGCCCCTTCTGTtgcttcattttcttcaagAGGACCAAGCAAAGAAAGTCCTGGAATTCTAAAACCAGACATCATAGGACCAGGTGTCAACATTCTAGCTGCTTGGGCTGTTTCTGTAGACAACAAACTCCCGccttataatattatttctgGTACTTCAATGTCTTGTCCTCATCTTAGTGGTATTGCTGCATTGATTAAAAGCTCTCACCCTGATTGGTCGCCGGCCGCCATAAAATCAGCAATCATGACTACTGCTAATACTCTCAACCTTGGTGGGAATCCTATAACGGATCAAAGACATTTACCTGCTGATGTCTTCACTACTGGTGCAGGACATGTTAATCCTGTTAAAGCAAATGATCCCGGTCTTATTTATGATATTCAACCTGAAGATTATGTTCCTTACTTGTGTGGTTTGGGTTATTCTGATAAAGAGATTGAAGTTATTGTTCAGTGGAAAGTGAAGTGTTCTGATGTGAAAAGTATACCAGAAGCACAACTGAACTATCCGTCTTTTTCGATTCTGTTGGGGTCTGAGTCACAGTTTTATACAAGAACTTTGACTAATGTTGGACCAGTAAATGCTACTTATAGAGTTGAACTTGAAGTGCCTTTGGCTTTAGGGATGAGTGTTAATCCTAGCGTGATATCATTTAGTGAGATTAATGAGAAGATTAGTTACTCGGTGGATTTTTTACCGCAAGTTAAGGAAAATCGAGGTAACCATACTTTCGCTCAGGGTTCTCTCACTTGGATATCTGATAAACACGTTGTTAGGGTACCTATATCTGTGATTTTCAAGTGA 2262 0.3895 MKTNYTMELILLVGLVFILCSISQITSVLAAEDNQEFDHNLMTYIVHVEKSEHIASFQLEDLHNWYHSFLPQGFAHKERMVFTYRNVASGFAVKLTPEEAKSLQEKDEIVSARPERTLSLHTTHTPTFMGLKQGQGLWRDDNLGKGVIIGLIDTGIYPFHPSFNDEGMPPPPSKWKGHCEFTGETTCNNKLIGARNLVKGAIQEPPFEDIFHGTHTSAEAAGRFVEDASVFSNAKGVAAGIAPHAHIAMYKVCNDKLGCPESAILAAMDISIEDGVDVLSLSLGLGSLSFFEDPIAVGAFAATQNGVFVSCSAANSGPGYNTLSNEAPWILTVGASTIDRKIVASAKLGTGDEFEGETLFQPKDFSQQLLPLVYAGSYGNKTQNQSWCLPGSLKNIDLSGKIVLCDIGGHVTGDVKGQEVLNANGVGMILANPEALGFTTYVLASVLPAVEVSYAAGLTIKDYINSTYNPTATILFKGTVIGDSLAPSVASFSSRGPSKESPGILKPDIIGPGVNILAAWAVSVDNKLPPYNIISGTSMSCPHLSGIAALIKSSHPDWSPAAIKSAIMTTANTLNLGGNPITDQRHLPADVFTTGAGHVNPVKANDPGLIYDIQPEDYVPYLCGLGYSDKEIEVIVQWKVKCSDVKSIPEAQLNYPSFSILLGSESQFYTRTLTNVGPVNATYRVELEVPLALGMSVNPSVISFSEINEKISYSVDFLPQVKENRGNHTFAQGSLTWISDKHVVRVPISVIFK 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00329 753 CDD PA_subtilisin_like 347 474 - -
Tsu05g00329 753 Pfam PA domain 371 459 IPR003137 -
Tsu05g00329 753 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Tsu05g00329 753 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Tsu05g00329 753 PRINTS Subtilisin serine protease family (S8) signature 535 551 IPR015500 -
Tsu05g00329 753 CDD Peptidases_S8_3 120 572 IPR034197 -
Tsu05g00329 753 Pfam Subtilase family 144 578 IPR000209 GO:0006508|GO:0008236
Tsu05g00329 753 Pfam Peptidase inhibitor I9 43 121 IPR010259 -
Tsu05g00329 753 Gene3D - 339 482 - -
Tsu05g00329 753 Pfam Fibronectin type-III domain 652 750 IPR041469 -
Tsu05g00329 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 752 IPR045051 -
Tsu05g00329 753 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 27 752 - -
Tsu05g00329 753 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 149 160 IPR023827 -
Tsu05g00329 753 Gene3D - 622 752 - -
Tsu05g00329 753 ProSiteProfiles Serine proteases, subtilase domain profile. 128 605 - -
Tsu05g00329 753 Gene3D Peptidase S8/S53 domain 146 618 IPR036852 GO:0004252|GO:0006508
Tsu05g00329 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 121 IPR037045 -
Tsu05g00329 753 SUPERFAMILY Subtilisin-like 120 609 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00329 Tsu-Chr5 2431287 2433548 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00329 43 750 Subtilisin-like Serine Gene Family AT5G67360 45.924 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00329 - - gmx:100783595 1154.81