Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00328 ATGAAAACCAACTATAGTATGGAGTTTGCATTTCTTGTTAGTATGATTTTCATTGTCTGCAGCATCAACACACATATATTAGTAGTTGCTGCAGAGGAGAATAAAGAACATGATGATCACAACTTAGTCACATACATTGTTCATGtcaaaaaatcagaaaatgtTGATTCATTTCAATCAGAAGATTTGCACGGTTGGTACCATTCATTCCTGCCACAAACTTTTGCTCACAAAGAAAGAATGGTTTTCACTTACCGTAACGTAGCCTCTGGGTTCGCTGTGAAGTTAACCGCTGAAGAAGCAAAATCTCTTCAAGAGAAAGATGAAGTTGTGTCAGCAAGACCTGAAAGAACACTTTCATTACACACAACTCACACTCCAACTTTCTTGGGACTGAAACAAGGACAAGGATTATGGAGCGATGATAACCTCGGAAAAGGCGTAATAATTGGACTCATAGACACCGGAATATACCCTTTTCATCCATCATTCAATGACGAAGGAATGCCTCCGCCACCTGCAAAATGGAAAGGCCACTGTGAATTCACTGGTGGCACAACATGCAACAATAAGCTCATAGGTGCAAGAAATTTAGACAAAAGCGCAATTCAAGAGCCTCCATTTGAAACATTATTCCATGGAACACACACTGCCGCAGAGGCAGCAGGAAGATTCGTAGAAGATGCAAGTGTTTTCGGTAATGCTAAAGGTGTAGCAGCTGGTATGGCACCTAATGCTCACATAGCAATGTACAAAGTTTGTGCTAGTGGCACTCGAAAATGCTACGAAAGTTCTATCTTAGCTGCAATGGATATAGCCATTGAAGATGGTGTAGATGTTCTTTCACTCTCTCTTGGTTTGGATTCTTCTGTTTCATTTTTTGAAGACCCAATTGCAATTGGTGCATTTGCTGCTACACAAAAAGGAGTTTTTGTTAGTTGTTCTGCTGCAAACTCCGGCCCTGAATACAACACTCTCTCAAATGAAGCTCCTTGGATCCTCACAGTAGGTGCAAGCACAATTGATCGAAAAATTGTAGCATCAGCTAAACTAGGAAATGGAGATGAATTTGAAGGTGAAACATTATTCCAACCCAAAGACTCTCCTAAAAAATTATTGCCACTTGTCTATGCAGGTTCAAATGGTATTTCAAGCCAGAACCAGAATCAGTCCTTTTGTCTTCCAGGTTCCTTAAAGAACATTGATGTAAGAGGCAAAGTAGTGTTGTGTGAAATAGGTGGAGGTGTTTCAAGTGTTTCCAAAGGACAAGAAGTTCTAAATTCAGGCGGTGTGGCGATGATCCTTGCAAACTCAGAAGCTATTGGATTCAGTACATTTGCTATCGCGCATGTTCTGCCAGCTGTTGATGTGAGTTATGCAGCTGGTTTAATAATCAAAGATTACATAAACTCAACCTACAATCCAACCGCAACAGTACTATTCAAAGGAAcagtaatcggtgattcacttgctccttctgttgtttcattttcttcaagaGGACCAAGTCAAGAAAGTCCTGGAATTCTAAAACCAGACATCATAGGACCAGGTGTCAACATTCTAGCTGCTTGGGCTATTTCTGTTGACAACGAACTCCCACCTTATAACATTGTTTCTGGTACTTCAATGTCTTGTCCTCACCTAAGTGGTATTGCTGCATTGATCAAAAGCTCTCACCCTGATTGGTCACCGGCCGCTATAAAATCAGCAATCATGACAACTGCTAGTACTCTCAACCTCGGCGGTACTCCTATAACGGATCAAAGACTTTTACCTGCAGATGTTTTCGCCACCGGTGCGGGACATGTTAATCCTGTTAAAGCTAATGATCCTGGTCTTGTTTATGATATTCAACCGGAAGATTATGTTCCTTATTTGTGTGGTATGGGTTATTCTGATAGAGAGATTGAAGTTATTGTTCAATGGAAAGTGAAGTGTTCTGATGTGAAAAGTATACCAGAAGCACAACTGAACTATCCGTCTTTTTCGATTCTGTTGGGGTCTGAGTCACAGTTTTACACAAGAACTTTGACTAATGTTGGACCAGTAAATGCTACTTATAGAGTTGAACTTGAAGTGCCTTTGGCTTTAGGTATGAGTGTTAATCCTAGTGTGGTAACATTTGGTGAGATTAATGAGAAGATTAGTTACTCGGTGGATTTTTTACCGCAAGTTAAGGAAAATCGAGGTAATGGCCTCACTGCAGCATTCGTAGCAGATGCGCGAGTACTTTGTCCAGCCATTCCAGCAGCAGCACTGGTCATGGACCCACTGTCCGAGGTTTCGGGTTCCAAATAG 2301 0.3998 MKTNYSMEFAFLVSMIFIVCSINTHILVVAAEENKEHDDHNLVTYIVHVKKSENVDSFQSEDLHGWYHSFLPQTFAHKERMVFTYRNVASGFAVKLTAEEAKSLQEKDEVVSARPERTLSLHTTHTPTFLGLKQGQGLWSDDNLGKGVIIGLIDTGIYPFHPSFNDEGMPPPPAKWKGHCEFTGGTTCNNKLIGARNLDKSAIQEPPFETLFHGTHTAAEAAGRFVEDASVFGNAKGVAAGMAPNAHIAMYKVCASGTRKCYESSILAAMDIAIEDGVDVLSLSLGLDSSVSFFEDPIAIGAFAATQKGVFVSCSAANSGPEYNTLSNEAPWILTVGASTIDRKIVASAKLGNGDEFEGETLFQPKDSPKKLLPLVYAGSNGISSQNQNQSFCLPGSLKNIDVRGKVVLCEIGGGVSSVSKGQEVLNSGGVAMILANSEAIGFSTFAIAHVLPAVDVSYAAGLIIKDYINSTYNPTATVLFKGTVIGDSLAPSVVSFSSRGPSQESPGILKPDIIGPGVNILAAWAISVDNELPPYNIVSGTSMSCPHLSGIAALIKSSHPDWSPAAIKSAIMTTASTLNLGGTPITDQRLLPADVFATGAGHVNPVKANDPGLVYDIQPEDYVPYLCGMGYSDREIEVIVQWKVKCSDVKSIPEAQLNYPSFSILLGSESQFYTRTLTNVGPVNATYRVELEVPLALGMSVNPSVVTFGEINEKISYSVDFLPQVKENRGNGLTAAFVADARVLCPAIPAAALVMDPLSEVSGSK 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00328 766 Pfam Fibronectin type-III domain 657 727 IPR041469 -
Tsu05g00328 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 28 122 IPR037045 -
Tsu05g00328 766 CDD PA_subtilisin_like 350 479 - -
Tsu05g00328 766 Gene3D - 342 487 - -
Tsu05g00328 766 ProSiteProfiles Serine proteases, subtilase domain profile. 129 610 - -
Tsu05g00328 766 Pfam Peptidase inhibitor I9 44 122 IPR010259 -
Tsu05g00328 766 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Tsu05g00328 766 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Tsu05g00328 766 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Tsu05g00328 766 SUPERFAMILY Subtilisin-like 121 614 IPR036852 GO:0004252|GO:0006508
Tsu05g00328 766 Gene3D - 627 740 - -
Tsu05g00328 766 CDD Peptidases_S8_3 121 577 IPR034197 -
Tsu05g00328 766 Pfam PA domain 374 463 IPR003137 -
Tsu05g00328 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 731 IPR045051 -
Tsu05g00328 766 Pfam Subtilase family 145 579 IPR000209 GO:0006508|GO:0008236
Tsu05g00328 766 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 150 161 IPR023827 -
Tsu05g00328 766 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 28 731 - -
Tsu05g00328 766 Gene3D Peptidase S8/S53 domain 147 623 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00328 Tsu-Chr5 2427617 2430681 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00328 7 722 Subtilisin-like Serine Gene Family AT5G67360 44.832 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00328 - - gmx:100783595 1102.81