Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00327 ATGGCTCTCTTTATGGGGACCTCAAAAGGATATGTGAGACTGACCTTGGACTTGTTTCGCAGTGTTGCTCGACCAAACACTGACGATCACACAATTACTTTTGGGGCCGATGTCACTCATCCACATCCTCGAAAAGATTCAAGCTCATCAATAGCTGCTGTTGTGGCTTCTCAATCTTGGCCCTTGAACACCAAGTATGCTGGTTTGGTTTGTGCCCAAGCATATCGACAGGAGATTATTCATGATCTTTTCAAAGAATGGCAAGATCCAATCAAGGAATCTAAACTGGAGGAATGA 297 0.4411 MALFMGTSKGYVRLTLDLFRSVARPNTDDHTITFGADVTHPHPRKDSSSSIAAVVASQSWPLNTKYAGLVCAQAYRQEIIHDLFKEWQDPIKESKLEE 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00327 98 Pfam Piwi domain 27 83 IPR003165 GO:0003676
Tsu05g00327 98 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 27 92 - -
Tsu05g00327 98 PANTHER ARGONAUTE1 27 92 - -
Tsu05g00327 98 Gene3D - 25 97 IPR036397 GO:0003676
Tsu05g00327 98 ProSiteProfiles Piwi domain profile. 30 98 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00327 Tsu-Chr5 2426932 2427511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00327 27 92 Eukaryotic Initiation Factors Gene Family AT1G48410 77.273 4.39e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00327 K11593 - rcu:8275074 106.301