Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00324 ATGATAAAAACCAACTACACAATGAAGCTTGCATTACTTGTTGGTCTCATTTTCATTCTCTGCAGCATCAACCAAATTACATCAGTACTTGCTGCAGAGGTGATACAAGAACATGATGATGAGAACTTAATGACATACATTGTTCATGtcaaaaaatcagaaaatgtTGCTTCTTTTCAATCAGAAGATTTCCATAACTTTTATCATTCATTTCTACCACAAACTTTTGCTCACAAAGAGAGAATGGTTTTCACTTACCGCAACGTAGCCTCTGGGTTTGCTGTGAAGCTCACACCAGAAGAAGCCAAGTCTCTTCAAGAAAAAGGTGAAATTGTGTCTGCAAGACCTGAAAGGACACTTTCATTACACACAACTCATACTCCAACTTTCTTGGGGTTAAAACAAGGACAAGGATTGTGGAGCGACGATAACCTTGGAAAAGGCGTTATTATTGGAGTCATAGACACAGGAATATACCCTTTTCATCCATCATTCAACGACGAAGGAATGCCACCACCACCTGCAAAATGGAGAGGACATTGCGAATTCACCGGAGAAGCAACATGCAACAATAAGCTCATAGGTGCAAGAAATTTAGTCAAAAGTGCACTTCAAGAGCCTCCACTTGAAAATTTCTTCCATGGAACACACACTGCTGCAGAGGCTGCAGGAAGATTCGTAGAAGATGCAAGTGTTTTTGGAAATGCTAAAGGTGTAGCTGCTGGTATGGCACCTAATGCTCACTTAGCAATGTACAAAGTATGTAATGACAAAATTGGATGCACTGAAAGTGCTATTTTAGCTGCAATGGATATAGCTATTGAAGATGGTGTAGATGTTCTTTCACTCTCTCTTGGTTTAGGTTCTCTTTCATTTTTTGAAGATCCTATTGCTATTGGTGCTTTTACTGCTACACGAAAAGGAATTTTTGTTAGTTGTTCTGCTGCAAACTCTGGCCCTGGATACAGTACTCTCTCAAATGAAGCTCCTTGGATCCTCACAGTAGGTGCAAGCACAATTGACAGAAAAATTGTTGCATCAGCAAAGCTTGGAAATGGAGATGAATTTGATGGTGAAACATTGTTCCAACCCAAAGACTTTTCTCAACAATTATTGCCACTTGTTTATGCAGGTTCAAATGGAATTTCAAACCAGAACCAGAATCAGTCTTTCTGTCTTCCAGGTTCCTTAAAGAACATTGATGTAAGTGGTAAAGTAGTGTTGTGTGATATAGGTGGAGGTGTTACAAGTGTTTCCAAAGGACAAGAAGTTCTAAATTCAGGCGGTGTGGCAATGATTATTGCAAACTCTGAAGCTCTTGGATTCAGCACTTTCGCTGTTCCTCATGTTCTTCCAGCTgttgaagtgagttatgcagcTGGTTTAATAAtcaaagattacattaactcaACCTACAATCCAACAGCAACGGTACTATTCAAAGGAACcgtaatcggtgattcacttgctcctactgttgtttcattttcttcaagaGGACCAAGTCAAGAAAGTCCTGGAATTCTAAAACCAGACATCATAGGACCAGGTGTCAACATTCTAGCTGCTTGGGCTATTTCTGTTGACAACGAACTCCCACCTTATAACATTGTTTCTGGTACTTCAATGTCTTGTCCTCACCTAAGTGGTATTGCTGCATTGATCAAAAGCTCTCACCCTGATTGGTCGCCGGCCGCAATAAAATCAGCAATCATGACAACTGCTAATATTGTCAACCTCGGCGGGACTCCAATAGTGGATCAAAGACTTTTACCTGCTGATATTTTCGCTACTGGTGCAGGACATGTTAATCCGGTTAAAGCAAATGATCCTGGTCTTGTTTATGATATTCAACCGGAAGATTATGTTCCTTATTTGTGTGGTATGGGTTATTCTGATGAAGAGGTTGAAGTTATTGTTCAATGGAAAGTAAAATGTTCTGATGTGAAAAGTATACCAGAAGCACAACTGAATTATccttctttctctattctcttAGGGTCTGATTCACAGTTGTATACAAGAACTTTGACTAATGTTGGACCAGTAAATGCTACTTATAGAGTTGAACTTGATGTGCCTTTGGCTTTAGGCATGAGTGTTAATCCTAGTGTGATAACATTTGGTGAGATTAATGAGAAGGTTAGTTACTCGGTCGATTTTATACCAGAAGTTAATGAAAATAGAGGTAACCATACTTTTGCTCAGGGTTCTCTCACTTGGGTATCTGATAAACATGCAGTTAGGGTACCTATATCAGTAATTTTCAAGTGA 2274 0.3738 MIKTNYTMKLALLVGLIFILCSINQITSVLAAEVIQEHDDENLMTYIVHVKKSENVASFQSEDFHNFYHSFLPQTFAHKERMVFTYRNVASGFAVKLTPEEAKSLQEKGEIVSARPERTLSLHTTHTPTFLGLKQGQGLWSDDNLGKGVIIGVIDTGIYPFHPSFNDEGMPPPPAKWRGHCEFTGEATCNNKLIGARNLVKSALQEPPLENFFHGTHTAAEAAGRFVEDASVFGNAKGVAAGMAPNAHLAMYKVCNDKIGCTESAILAAMDIAIEDGVDVLSLSLGLGSLSFFEDPIAIGAFTATRKGIFVSCSAANSGPGYSTLSNEAPWILTVGASTIDRKIVASAKLGNGDEFDGETLFQPKDFSQQLLPLVYAGSNGISNQNQNQSFCLPGSLKNIDVSGKVVLCDIGGGVTSVSKGQEVLNSGGVAMIIANSEALGFSTFAVPHVLPAVEVSYAAGLIIKDYINSTYNPTATVLFKGTVIGDSLAPTVVSFSSRGPSQESPGILKPDIIGPGVNILAAWAISVDNELPPYNIVSGTSMSCPHLSGIAALIKSSHPDWSPAAIKSAIMTTANIVNLGGTPIVDQRLLPADIFATGAGHVNPVKANDPGLVYDIQPEDYVPYLCGMGYSDEEVEVIVQWKVKCSDVKSIPEAQLNYPSFSILLGSDSQLYTRTLTNVGPVNATYRVELDVPLALGMSVNPSVITFGEINEKVSYSVDFIPEVNENRGNHTFAQGSLTWVSDKHAVRVPISVIFK 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00324 757 SUPERFAMILY Subtilisin-like 122 613 IPR036852 GO:0004252|GO:0006508
Tsu05g00324 757 Pfam Fibronectin type-III domain 656 754 IPR041469 -
Tsu05g00324 757 ProSiteProfiles Serine proteases, subtilase domain profile. 130 609 - -
Tsu05g00324 757 Gene3D Peptidase S8/S53 domain 148 622 IPR036852 GO:0004252|GO:0006508
Tsu05g00324 757 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 28 123 IPR037045 -
Tsu05g00324 757 Gene3D - 626 756 - -
Tsu05g00324 757 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 28 756 - -
Tsu05g00324 757 CDD PA_subtilisin_like 349 478 - -
Tsu05g00324 757 Pfam Peptidase inhibitor I9 45 123 IPR010259 -
Tsu05g00324 757 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 756 IPR045051 -
Tsu05g00324 757 Pfam Subtilase family 146 578 IPR000209 GO:0006508|GO:0008236
Tsu05g00324 757 CDD Peptidases_S8_3 122 576 IPR034197 -
Tsu05g00324 757 Gene3D - 341 486 - -
Tsu05g00324 757 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Tsu05g00324 757 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Tsu05g00324 757 PRINTS Subtilisin serine protease family (S8) signature 146 165 IPR015500 -
Tsu05g00324 757 Pfam PA domain 373 462 IPR003137 -
Tsu05g00324 757 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 151 162 IPR023827 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00324 Tsu-Chr5 2416372 2418645 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00324 18 757 Subtilisin-like Serine Gene Family AT1G04110 41.911 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00324 - - gmx:100783595 1188.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00324 05 2416372 2418645 Tsu05g00324 05 2416372 2418645 ECH
Tsu04g02467 04 27850730 27852985 Tsu05g00324 05 2416372 2418645 PCT