Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00323 ATGACCTTAACTCCAATACTATTGATTCTTGGTTTCATTCTTGTGCTAAGTATCTATCCAACTTCAGCACATAATAAATACCAAGAATTCATAGCAGCAAATGAGAAACTTGAAGATGATAGTAACTTATTGACTTACATTGTTCATGTCAACAAGCCTTCTCTTCAATCTAAGGAGAGTTTGCATGGTTGGTATCGTTCACTCTTGCCGGACACTACAAAATCTCAAAACCAACAGCGCGTTATTTTCTCATACCGAAACATAGTAGATGGATTTGCGGTGAAATTGACCGCGGAAGAAGCCAAGTCTCTAGAAGAGAAGGAGGAGGTTCTGTCAATTCGACCAGAGAAAGTCTTTTCATTACACACAACTCATACTCCGAGCTTCTTGGGGTTGCAGCAGAATCAAGAATTGTGGCAAAATTCTAATCTCGGTAAGGGGATCATAATTGGAGTCCTGGACACAGGAATATACCCTTTGCATCCTTCTTTTTCGGACGAAGGAATGCCGTCTCCACCTGCAAAATGGAATGGCCATTGTGAATTTACAGGGAAGAGGGTTTGTAACAATAAGCTCATTGGAGCAAGGAACTTTGTAAATTCATCCCTCCCGTTCGATGATGTTGGCCACGGAACTCACACGTCCAGCACAGCCGCCGGAAGGTCCGTGCAAGGTGCCAATGTGTTTGGAAATGCTAATGGTGCAGCAACTGGCATGGCACCAGATGCACACTTGGCAGTGTACAAAGTATGCAGCATCTACGGTTGTGCTGAAAGTGCAATATTAGCTGGAATGGATGCTGcagttgatgatggtgttgatgTACTTTCTCTCTCCCTTGGAGGACCAgccaaatttttatttgaagatgCAATTGCACTCGGCGCATTTAGtgcaatacaaaagggaatttTTGTTAGTTGTTCAGCTGCAAATTCAGGTCCTGCTTATGGTACATTATCTAATGAAGCACCATGGATTCTAACTGTTGGTGCTAGCACAACTGACAGAAAAATAGAGGCAATAGCTAAGCTTGGCAACGGGAAGGAATATCTCGGAGAATCAGTTTTCCAACCAAAAGACTTTGCATCAACATTATTGCCACTTGTGTATGCAGGTTCACTTAATACAAGTGATGATTCAATTGCCTTTTGTGACCCTTTTTCCATGAAGAACGTCGATGTTAAGGGAAAGGTAGTTTTGTGTGATCAAGGCGGATTTGTTCGAAGAGTAGTTAAAGGTCAAGCGGTTAAAGATGCTGGCGGCGCTGCTATGATACTTGTTAACAGTAAACTTGAAGCTTTCAATCCAATTGCTGATGTTCATGTTCTACCTGCAGTTCATGTAAGTTACTTTGCTGGTTTATCCATCAAAGATTATATAAACTCAACTTCAACGCCGAAAGCCACAATTATATTCAAAGGAACTGTTATTGGAAATCCACTTGCCCCTCAAGTTGCTTCATTTTCATCAAGAGGTCCAAGCAAAGTAAGCCCTGGAATTCTGAAACCAGACATAATTGGACCTGGATTGAACATTCTAGCAGCATGGCCTATATCATTAGACAATAGTACTACACCGTCGTTTAACATAATTTCAGGTACCTCAATGTCATGCCCTCATCTCAGTGGCATTGCCGCGTTGTTGAAAAACTCTCATCCAGATTGGTCACCAGCTGCTATAAAATCAGCAATCATGACAACTGCTAATACTCTCAACCTTCATGAAAAGCCTATTTTGGACGAAAGGCTTAAACCAGCTGATTTATTTGCCGTTGGTGCCGGACATGTTAACCCTTTGAAAGCGAACGATCCAGGACTTATTTATGATATTGAAACAAATGATTATGTTCCTTATTTGTGTGGTTTGAATTATACTGATAGACAAGTTGGAATTATTTTGCAACAGAAAGTGAAATGTTCCGAGGTAAAAAGCATACCACAGCAACAACTTAATTATCCATCATTTTCTATTATCTTAGGGTCTTCGTCGCAGTTTTATACTAGAACAGTGACAAATGTTGGACCTGTTAACACAACTTACAATGTGGTAATCGACGCGCCTTTGGCGGTTGGTATGAGTGTAAGACCATCTCAAATAACATTCACTGAGGTGAAGCAAAAGGTTACATACTTGGTTGATTTTGTACCCGAAGACGAAAAGAATAGAGGTGATAACATGATTGCTCAGGGGTCTATCAAATGGGTTTCTGGAAAGTATTCTGTTAGCATTCCTGTATCTGTCATCTTTGTGTGA 2256 0.3985 MTLTPILLILGFILVLSIYPTSAHNKYQEFIAANEKLEDDSNLLTYIVHVNKPSLQSKESLHGWYRSLLPDTTKSQNQQRVIFSYRNIVDGFAVKLTAEEAKSLEEKEEVLSIRPEKVFSLHTTHTPSFLGLQQNQELWQNSNLGKGIIIGVLDTGIYPLHPSFSDEGMPSPPAKWNGHCEFTGKRVCNNKLIGARNFVNSSLPFDDVGHGTHTSSTAAGRSVQGANVFGNANGAATGMAPDAHLAVYKVCSIYGCAESAILAGMDAAVDDGVDVLSLSLGGPAKFLFEDAIALGAFSAIQKGIFVSCSAANSGPAYGTLSNEAPWILTVGASTTDRKIEAIAKLGNGKEYLGESVFQPKDFASTLLPLVYAGSLNTSDDSIAFCDPFSMKNVDVKGKVVLCDQGGFVRRVVKGQAVKDAGGAAMILVNSKLEAFNPIADVHVLPAVHVSYFAGLSIKDYINSTSTPKATIIFKGTVIGNPLAPQVASFSSRGPSKVSPGILKPDIIGPGLNILAAWPISLDNSTTPSFNIISGTSMSCPHLSGIAALLKNSHPDWSPAAIKSAIMTTANTLNLHEKPILDERLKPADLFAVGAGHVNPLKANDPGLIYDIETNDYVPYLCGLNYTDRQVGIILQQKVKCSEVKSIPQQQLNYPSFSIILGSSSQFYTRTVTNVGPVNTTYNVVIDAPLAVGMSVRPSQITFTEVKQKVTYLVDFVPEDEKNRGDNMIAQGSIKWVSGKYSVSIPVSVIFV 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00323 751 Pfam Peptidase inhibitor I9 45 122 IPR010259 -
Tsu05g00323 751 SUPERFAMILY Subtilisin-like 121 607 IPR036852 GO:0004252|GO:0006508
Tsu05g00323 751 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 750 IPR045051 -
Tsu05g00323 751 Gene3D - 336 479 - -
Tsu05g00323 751 ProSiteProfiles Serine proteases, subtilase domain profile. 118 603 - -
Tsu05g00323 751 Gene3D Peptidase S8/S53 domain 147 616 IPR036852 GO:0004252|GO:0006508
Tsu05g00323 751 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 28 750 - -
Tsu05g00323 751 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Tsu05g00323 751 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Tsu05g00323 751 PRINTS Subtilisin serine protease family (S8) signature 533 549 IPR015500 -
Tsu05g00323 751 Pfam Subtilase family 145 576 IPR000209 GO:0006508|GO:0008236
Tsu05g00323 751 Pfam Fibronectin type-III domain 650 748 IPR041469 -
Tsu05g00323 751 Gene3D - 620 750 - -
Tsu05g00323 751 SUPERFAMILY PA domain 368 491 IPR046450 -
Tsu05g00323 751 CDD Peptidases_S8_3 121 570 IPR034197 -
Tsu05g00323 751 CDD PA_subtilisin_like 344 471 - -
Tsu05g00323 751 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 150 161 IPR023827 -
Tsu05g00323 751 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 30 122 IPR037045 -
Tsu05g00323 751 Pfam PA domain 368 456 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00323 Tsu-Chr5 2412710 2414965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00323 45 748 Subtilisin-like Serine Gene Family AT5G67360 46.175 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00323 - - gmx:100799902 1066.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00323 05 2412710 2414965 Tsu05g00323 05 2412710 2414965 ECH