Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00314 ATGGCTCATTTGGTTTATGGTGAAACTCCATCTTTTGGAAACTCACACCATGGACAAGGTCAACAACTTGTTTCATTTCCAACCACTTCAAGTTCTTTAAGGATTCTACTCTTACATGGTAACTTAGATATTTACATCCATGAAGCCAAAAACCTTCCTAACATGGACACTTTTCATAAGAAAATGGGAGAAATGTTTTCAATCTTGCCTAAAAAACTTGGTGGTAAAATTGAAGGCAAAATGTCACATAATATAACTAGTGATCCATATGTAACTGTTTCTGTAGCTGGTGCTGTTATTGCAAGAACTTTTGTCATCAGAAACAATGAAAACCCGGTTTGGAATCAGCATTTTAATGTTCCTGTTGCTCATTTTGCATCAGAGATTCATTTTGTTGTAAAAGACAATGATATTGTTGGTTCACAGGTTATTGGTGCAGTAGGAATTCCAGTTGAAAAGTTATGTAATGGTACAAAAATTGAAGGTTTTTTCCCTATTGTTAATACTAATGGAAAACCCTTTAAGACTGATACAGTTTTGAGCTTATCAATTCAGTATACTCCTGTTGATAAGGTAACCCTTTATAGAAATGGTGTTGGTGATGATTATGAAGGTGTTCCTGCTACATATTTTCCACTTAGAAAAGGCGGAAAAGTTACACTTTATCAAGATGCTCATGTTCCACAAGGTTGTCTTCCTAGTTTGAAGATTGATGGTGGTCATGAGCATGGAGATTGTTGGCATGATATCTTTGATGCAATAAGTCAAGCACGTCGATTAGTGTATATTGTTGGTTGGTCTGTTTACTACAATGTTAGTCTCATTAGGGATACTAGAGATGGAAAAGATTGTACTTTAGGTGAGGTTCTTAAAGCTAAATCACAAGAAGGTGTGAGAGTTCTTCTACTTGTGTGGGATGATCCTACTTCCAAAAGCATGCTTGGACATAAAACAGTTGGACTTATGAAAACTTACGACGAGGAAACTCGCCATTTTTTCAAGCACTCTTCAGTTAAAGTGCTTCTTTGTCCAAGGGCTGGAGGAAAAGGACATAGCTGGCTCAAACAGCAGGAAGCTGGAACAATCTATACTCATCATCAGAAGACAGTCATTGTGGATGCTGATGCTGGTCAGCATAAAAGAAAGATTGTAGCTTTCATTGGTGGTCTTGATTTATGTCTTGGAAGATATGATACGCCAAAACATTCTCTCTTTAGGACTTTGCAGACAACACACAAAGATGACTTTCATAATCCTAACATTGAGGGTTCTGTTACTGGTTGTCCAAGACAACCATGGCATGATTTGCATTCCAAAGTTGATGGTCCTGCTGCATATGATATCCTCACAAATTTCGAGGAGCGTTGGTCAAGAGCATTAAGAATGACTAGACTTCAAAAGATGAAAACTTCACATGATGATTCATTATTGAAAATTGATAGAATCTCTGACATTGTTGGCATTAATGAAGTTCCTAGCCTAGATGAACATAACCAAGAGACATGGCATGTTCAGATCTTCCGTTCGATTGATTCTAATTCTGTCAAAGGATTTCCAAAAGAACCGAAAGATGCTATACAAAGGAACTTGGTTTGTGGAAAGAATGTAATGATAGACATGAGCATACATTCTGCATATGTCAAAGCAATCAGAGCAGCACAAAAGTTCATTTATATTGAGAATCAATATTTTCTCGGCTCATCATATAATTGGGATTTGTACAAAGACCTCGGTGCAAACAACTTAATTCCAATGGAAATTGCGCTAAAAATAGCCGAAAAAATCAAACAGAAAGAGAGATTCTCAGTGTATATTGTCATTCCTATGTGGCCTGAAGGTGTTCCTTCAAGTAGAGCTACGCAGCGGATTCTCTTTTGGCAGTTCAAAACAATGCAAATGATGTATGAAACAATTTACAAGGCTTTAGTAGAAGCTGAACTTGAAAATGAGTATGAACCACAAGACTACTTGAACTTCTTTTGCCTTGGCAATCGCGAGCTCTCCGATAatgaaaacaattcaaaaaccgTAAAACCTACCGGACAAAACACTCCTCAGGTACTCACTCAAAAGAACAGAAGATTCATGATTTATGTTCATTCAAAAGGAATGATAGTGGATGATGAATATGTGTTAATGGGATCTGCCAACATAAATCAGAGATCCATGGAAGGCACTAGAGACACTGAGATTGCAATGGGAGCATATCAGCCTAATCATACTTGGGCAAACAAGAAATCTAAACCTCATGGGCAGGCAAGATTTATAAACTTTGAAGTGCATGGTTATAGAATGTCACTGTGGAGTGAGCACATAGGAGGTGTTGAAGAATGTTTCAAGCAACCAGAGAGCATTGAATGTGTGAGAAGGATAAGATCATTGAGTGAGTATAATTGGAGACAATATGCGGCAGATGAAGTAACTGAAATGAAAAGTCATTTAATGAAATACCCTCTTGAGGTTGACTCAAAGGGCAAGGTGAAGCCTCTTTTTGGCTGTGAAACATTCCCTGATGTTGGTGGAAATATAAAGGGCACCTTTACTGTATTTCAAGAAAATATCACCATTTGA 2571 0.3718 MAHLVYGETPSFGNSHHGQGQQLVSFPTTSSSLRILLLHGNLDIYIHEAKNLPNMDTFHKKMGEMFSILPKKLGGKIEGKMSHNITSDPYVTVSVAGAVIARTFVIRNNENPVWNQHFNVPVAHFASEIHFVVKDNDIVGSQVIGAVGIPVEKLCNGTKIEGFFPIVNTNGKPFKTDTVLSLSIQYTPVDKVTLYRNGVGDDYEGVPATYFPLRKGGKVTLYQDAHVPQGCLPSLKIDGGHEHGDCWHDIFDAISQARRLVYIVGWSVYYNVSLIRDTRDGKDCTLGEVLKAKSQEGVRVLLLVWDDPTSKSMLGHKTVGLMKTYDEETRHFFKHSSVKVLLCPRAGGKGHSWLKQQEAGTIYTHHQKTVIVDADAGQHKRKIVAFIGGLDLCLGRYDTPKHSLFRTLQTTHKDDFHNPNIEGSVTGCPRQPWHDLHSKVDGPAAYDILTNFEERWSRALRMTRLQKMKTSHDDSLLKIDRISDIVGINEVPSLDEHNQETWHVQIFRSIDSNSVKGFPKEPKDAIQRNLVCGKNVMIDMSIHSAYVKAIRAAQKFIYIENQYFLGSSYNWDLYKDLGANNLIPMEIALKIAEKIKQKERFSVYIVIPMWPEGVPSSRATQRILFWQFKTMQMMYETIYKALVEAELENEYEPQDYLNFFCLGNRELSDNENNSKTVKPTGQNTPQVLTQKNRRFMIYVHSKGMIVDDEYVLMGSANINQRSMEGTRDTEIAMGAYQPNHTWANKKSKPHGQARFINFEVHGYRMSLWSEHIGGVEECFKQPESIECVRRIRSLSEYNWRQYAADEVTEMKSHLMKYPLEVDSKGKVKPLFGCETFPDVGGNIKGTFTVFQENITI 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00314 856 Pfam Phospholipase D C terminal 776 846 IPR024632 -
Tsu05g00314 856 Gene3D Endonuclease Chain A 486 748 - -
Tsu05g00314 856 SUPERFAMILY Phospholipase D/nuclease 529 736 - -
Tsu05g00314 856 SUPERFAMILY Phospholipase D/nuclease 202 462 - -
Tsu05g00314 856 SMART C2_3c 41 163 IPR000008 -
Tsu05g00314 856 Pfam PLD-like domain 548 731 IPR025202 -
Tsu05g00314 856 Gene3D C2 domain 35 180 IPR035892 -
Tsu05g00314 856 ProSiteProfiles C2 domain profile. 18 164 IPR000008 -
Tsu05g00314 856 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 189 IPR035892 -
Tsu05g00314 856 Pfam Phospholipase D Active site motif 362 396 IPR001736 GO:0003824
Tsu05g00314 856 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 695 722 IPR001736 GO:0003824
Tsu05g00314 856 CDD C2_plant_PLD 36 187 - -
Tsu05g00314 856 Pfam C2 domain 40 166 IPR000008 -
Tsu05g00314 856 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 361 396 IPR001736 GO:0003824
Tsu05g00314 856 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 8 856 - -
Tsu05g00314 856 PIRSF PLD_plant 27 856 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Tsu05g00314 856 PANTHER PHOSPHOLIPASE D 8 856 IPR015679 -
Tsu05g00314 856 SMART pld_4 695 722 IPR001736 GO:0003824
Tsu05g00314 856 SMART pld_4 361 396 IPR001736 GO:0003824
Tsu05g00314 856 Gene3D Endonuclease Chain A 234 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00314 Tsu-Chr5 2346754 2351185 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00314 15 856 Phospholipase D Gene Family (Wang group) AT2G42010 67.317 0.0 1253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00314 K01115 - gmx:100786241 1492.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00314 05 2346754 2351185 Tsu05g00314 05 2346754 2351185 ECH