Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00293 ATGGCGGAACCTTTGAATGAACCTGACGTTGTTCAACCTAATATTGTTGTCAACACCGcccattattttttaaaatgtgaaaaatataaGGTGCGAGATGACATGATCAAATGGTGTCGCAATGAGGCGGTAAAAGCTGGATTTACTTTGGTGATTGGGAAATCAGATAACGGTTCTTACcgaagaaaaaagttttttgtATTGGGTTGCTCAAGAGGCGATGCATACAAAGAAACGAAAAGGAAATTAAAGAAAGAAGACACAGCTACGAGAAAATTTAATTGTCCGTTTAGGCTGCGAGGTTACTTTTTGGCATCACAGGAATGGAATCTAAGTGTTGTGTGTGGTGAACATAACCATGAGTTGGCAAAAAACCTAGAAGGTCATACTCTTGCGGGACGTTTAAAACCTGAAGAGAAGGAGTGTGTCCACGAGTTGACAAGGAATTTGGTGCCTCCAAAGAACATTTTGTCCACGTTGAAAGGGAGAAATCCAGAGAGCAAGACAAATGTGAAGCAAATCTACAATGCACGCCAAAGGTTCAAAAAAGATGTTAGGGGTGATTTGTCTGAACTGCAGCAACTCATGAAGTGTTGTGAAAGtcacaaatatttttacaagtGTAGAACGGTTGATGACTCGACAACTGTACAAGatattttttgggcacatcctgAAAGTGTGaaattgtttaacactttcCCTACTGTTTTAATGTTAGATTCAATGTACAAAACCAATAAGTATAAaatgcctttatttgagatGGTTGGTGTAACTTCAACCGAGGAGTCGTACAATGTTGGTTTTGCCTATATTGCTAATGAAAAAGAAGACGATTTCACATGGGCCCTTGACACGTGTGTGAGTCTTTTGAAGAGTAAAGACACAGTGCCGAAGgaacgTTTGAAATCATCAGACTATAGTATGAAACTACAAATCAGGGACCAACTGCGTCAGATAGCATATCCAGAAATTACATCGTTGACTCCACCGGTTAAACAGTTAGATACGAAGGGTGCAAAAAAACGGGGAAGGTCATCTAAATGCAATAGTTCTACCACCAGATCTCCATCTTATTGGGAGTACATTGATGCCCAATATCCTGACTCTCAAACATCACAGTCACAACCATCTAAACCCAAAAGGAAGACTGCTCGCATTGGTACTTTGTCTCCTAATGCTATACCTGGCCGTTCAATTCGATATATTGAGTATATGCCACCATTCATGCATTCACATATTGAGGACATTATTGATGTTAAGGGTGACGGTCATTGTGGATTCCGCGTTGCAGCAGAGTATCTTAATAAGGGTGAAGATTGTCAAGGATTAATTCGTCATAAACTTATTAGAGAGTTAACCATGTTTAGAAAAGAGTACTTGAATATTTACGGTACTGAGAAACGTCTACAATACATTCTCGATGGTTTGTACCCTCCAAAAGTTATGCCTAAGAGTGGTATTGCACCACCAGAAAAATGGTTCATGTTTCCAGATATGGGGCATATCCTTGCAACGGCCTACAATCGCATTGTAGTTGAATTGACTAAGCATCAGATTGGCCATTCTGAAACCTTTTTTCCATTGCGCGGTCGTCCACTGTTGGATCCATCTTCACGCATTATGTGTATTGGTATGGTTCCAAATCATTTTGTGTATGTAAAATTGAAGGCTGGCTGTCCACTGCCTCCAACTTGTAAGGAATGGAAAACTCATCGTGCGTCAGAGGCTGAGACTTGGGAGGATACATTTTTGGACCGGATGGCTGAGTTTGACGAActgatgaagaatgaaaaaggtgAGATGGATACAAATGAAGATGATCCCGTCATTCTGAGCTGA 1845 0.3783 MAEPLNEPDVVQPNIVVNTAHYFLKCEKYKVRDDMIKWCRNEAVKAGFTLVIGKSDNGSYRRKKFFVLGCSRGDAYKETKRKLKKEDTATRKFNCPFRLRGYFLASQEWNLSVVCGEHNHELAKNLEGHTLAGRLKPEEKECVHELTRNLVPPKNILSTLKGRNPESKTNVKQIYNARQRFKKDVRGDLSELQQLMKCCESHKYFYKCRTVDDSTTVQDIFWAHPESVKLFNTFPTVLMLDSMYKTNKYKMPLFEMVGVTSTEESYNVGFAYIANEKEDDFTWALDTCVSLLKSKDTVPKERLKSSDYSMKLQIRDQLRQIAYPEITSLTPPVKQLDTKGAKKRGRSSKCNSSTTRSPSYWEYIDAQYPDSQTSQSQPSKPKRKTARIGTLSPNAIPGRSIRYIEYMPPFMHSHIEDIIDVKGDGHCGFRVAAEYLNKGEDCQGLIRHKLIRELTMFRKEYLNIYGTEKRLQYILDGLYPPKVMPKSGIAPPEKWFMFPDMGHILATAYNRIVVELTKHQIGHSETFFPLRGRPLLDPSSRIMCIGMVPNHFVYVKLKAGCPLPPTCKEWKTHRASEAETWEDTFLDRMAEFDELMKNEKGEMDTNEDDPVILS 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00293 614 MobiDBLite consensus disorder prediction 369 393 - -
Tsu05g00293 614 MobiDBLite consensus disorder prediction 369 383 - -
Tsu05g00293 614 Pfam Transcription factor AFT 79 122 IPR014842 GO:0000981|GO:0036086
Tsu05g00293 614 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 75 292 IPR031052 GO:0006355
Tsu05g00293 614 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 75 292 - -
Tsu05g00293 614 Pfam MULE transposase domain 237 311 IPR018289 -
Tsu05g00293 614 MobiDBLite consensus disorder prediction 333 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00293 Tsu-Chr5 2165201 2167250 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu05g00293 MULE 6.4e-14 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00293 - - mtr:MTR_3g014480 249.595