Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00282 atgaaatttttaacttcatttttGTTTCTCTGTTTGTTTTCAACTCTTATTCTTGTGGATTCTGACTCTCTACCCCCAAATGAAGtTTGGGCACTTACAAGCTTTAAAGAATCAATCTATGAAGACCCAAATCTAGCTTTATCAAATTGGAATATGTTGGAATCAGATCTTTGTAACTGGTTTGGTGTCACATGCACTATGGCTAGAGATCATGTTATCAAGCTAAATATTTCAGGTTCATCAATGAAGGGTTTTCTTGCAAGAGAATTAGGACAAATCACCTATTTGCAAGAATTAATTTTGCATGGGAACAATCTAATTGGAACAATACCTAAAGAGTTATGTGTGTTGAAATCTCTCAAGGTGTTGGATTTGGGAATGAATCAGTTAACAGGACCGATTCCTTCAGAGATTGGAAATTTAACTCAACTTGTGAACATAAATCTTCAGTCCAATGGGTTGACTGGTAGGTTACCTTCTGAGTTTGGAAATTTGAGATACCTTCAAGAGGTTCGACTCGATAGGAATAAGCTTCAAGGACCTGTTCCTGCTAGTGGCACTTACAACTTTGCTTCAAATATGCATGGGATGTATGCATCAACCGAAAATGCAACTGGCTTCTGTCGACCGCCTCAGTTAAAAATAGCAGacttttcatataattttttagttggTAGTATACCAAAATGCTTGGAGTTTCTTCCAAGGTCAAGCTTTCAAGGGAACTGCCTCCAGAGCAATGATATAAACCAGCGGCCTTCCATACAATGCGGCGGTGCTTCACCTGCCAAGAGTCAGCCAGTAAGGAACGACAACCAATACCACGAAATAGCTGATCATGTACACAAGAATCACAGATCATCGAAACCTACTTGGCTTTTGGCTCTAGAAATAGTAGCAGGAACTATGGTTGGTTCTCTCTTTCTGATTGCTACTCTCGCTGCTGTCCAGAGATGCAACAACAAATCATCCATCATTATTCCTTGGAAAAAATCTTCCAGTCAGAAAGATCACACTACAGTATATATAGACCCGGATATGTTAAAGGACGTGAGAAGATATAGCAGACAAGAGCTTGAAGAGGCCTGCGAAGACTTCAGCAACATCATTGGGTCCTCACCGGACAGTGTGGTCTACAAGGGAACCATGAAAGGTGGACCTGAGATTGCTGTAATTTCCCTCTGCATCAAGGAGGAACATTGGACAGGATATCTGGAACTCTACTTTCAGAGAGAGGTGGCAGAATTGGCAAGGTTAAATCATGAGAATTCTGGAAAACTGCTTGGATATTGTAAAGAGAGCAATCCGTTTTCAAGGATGTTGGTTTTCGACTATGCTTCCAATGGGACACTTCACGAGCACTTACATTGTTATGAAGAAGGATGCCAGTTCTCTTGGACACGGCGTATGAAAATTGTCATAGGAATTGCTCGTGGACTCAAATATTTGCACACAGAAGTTGAACCTCCATTCACTATCTCAGAGCTTAATTCTAGTGCCGTATACCTTACAGAAGAATTTTCCCCTAAGttggttgattttgaaagttgGAAGACAATTCTTGAAAGATCAGAAAAGAATTCTGGTACTATTAGCAGCCAGGGTGCTGTTTGTGTTCTTCCAAACTCCCTCGAGGCACGTCATCATGATACCAAAGGAAACGTACATGCTTTTGGAGTACTTCTACTAGAGATAATCAGCGGGCGACAGCCATACTGTAAAGAAAAAGGATACTTGGTGGATTGGGCTAAAGACTATCTCGAAAAGCCAGAAGTAATGTCACATTTGGTGAATCCAGAATTGAAAAATTTTAGAGACGAGGACCTCAAAGTGATATGCGAGGTGATAACTCTTTGCATCAATCCTGATACAACTGCACGTCCATCTATGCGAGAAATATGCAGCATGCTGGAGAGCAGAATCGACACATCAGTAAGCGTGGATCTCAAGTCATCATCTTTGGCTTGGGCTGAACTTGCTCTTTTATCATAA 1992 0.3991 MKFLTSFLFLCLFSTLILVDSDSLPPNEVWALTSFKESIYEDPNLALSNWNMLESDLCNWFGVTCTMARDHVIKLNISGSSMKGFLARELGQITYLQELILHGNNLIGTIPKELCVLKSLKVLDLGMNQLTGPIPSEIGNLTQLVNINLQSNGLTGRLPSEFGNLRYLQEVRLDRNKLQGPVPASGTYNFASNMHGMYASTENATGFCRPPQLKIADFSYNFLVGSIPKCLEFLPRSSFQGNCLQSNDINQRPSIQCGGASPAKSQPVRNDNQYHEIADHVHKNHRSSKPTWLLALEIVAGTMVGSLFLIATLAAVQRCNNKSSIIIPWKKSSSQKDHTTVYIDPDMLKDVRRYSRQELEEACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAELARLNHENSGKLLGYCKESNPFSRMLVFDYASNGTLHEHLHCYEEGCQFSWTRRMKIVIGIARGLKYLHTEVEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGTISSQGAVCVLPNSLEARHHDTKGNVHAFGVLLLEIISGRQPYCKEKGYLVDWAKDYLEKPEVMSHLVNPELKNFRDEDLKVICEVITLCINPDTTARPSMREICSMLESRIDTSVSVDLKSSSLAWAELALLS 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00282 663 PANTHER PROTEIN MALE DISCOVERER 2 6 661 - -
Tsu05g00282 663 Pfam Leucine rich repeat 95 154 IPR001611 GO:0005515
Tsu05g00282 663 Gene3D Phosphorylase Kinase; domain 1 348 445 - -
Tsu05g00282 663 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 661 - -
Tsu05g00282 663 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Tsu05g00282 663 Pfam Protein tyrosine and serine/threonine kinase 368 637 IPR001245 GO:0004672|GO:0006468
Tsu05g00282 663 SUPERFAMILY L domain-like 25 235 - -
Tsu05g00282 663 ProSiteProfiles Protein kinase domain profile. 364 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00282 663 Gene3D Ribonuclease Inhibitor 140 347 IPR032675 -
Tsu05g00282 663 SUPERFAMILY Protein kinase-like (PK-like) 342 638 IPR011009 -
Tsu05g00282 663 Gene3D Transferase(Phosphotransferase) domain 1 446 653 - -
Tsu05g00282 663 Gene3D Ribonuclease Inhibitor 27 139 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00282 Tsu-Chr5 2089600 2093609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00282 1 643 Receptor kinase-like Gene Family AT2G35620 28.182 2.93e-55 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Tsu05g00282 PK_Tyr_Ser-Thr 6.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00282 - - gmx:100794714 1084.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00282 05 2089600 2093609 Tsu05g00282 05 2089600 2093609 ECH
Tsu05g00282 05 2089600 2093609 Tsu02g00478 02 3970932 3975792 PCT