Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00244 ATGACTTCCAATACTACATCTGGAAATGGTTGTTCGGCGCCGATGCAGTCAACATCTAATGGTGTATTTCAGGGAGATAACCCTCTTGAGTATGCACTTCCCTTGGCTATTTTGCAGATATGCCTTGTTCTTGTAGTCACAAGGGGATTGGCATATCTTCTAAAACCTTTAAGGCAACCGCGAGTTATTGCAGAGATTGTTGGAGGAATACTACTTGGGCCATCAGCTCTTGGCCGGAATAAAAGCTATCTGCATGCAGTTTTCCCACCCAAGAGTCTTACAGTATTAGATACTCTAGCAAACCTTGGCcttatattctttctatttttagCTGGCATAGAGTTAGATCCCAAATCTCTGCGAAAAACTGGAGGACGAGTCCTCGCAATTGCTATTGCCGGAATAAGCTTACCGTTTGCACTAGGTATTGGTTCATCGTTTGTGCTGCAAGCAACGATTGCCAAAGGTGTAAACACTTCTGCATTTCTCGTATATATGGGAGTTGCGCTGTCTATAACTGCGTTTCCTGTATTAGCCCGTATTTTGGCCGAGTTAAAACTTCTAACCACTAGTGTCGGCAGAATGGCTATGTCGGCTGCAGCGGTTAATGATGTAGCAGCCTGGATTCTTCTTGCTCTGGCTGTTGCCTTATCAGGCAATAGCCAATCTCCATTTGTGTCATTGTGGGTTTTCCTAAGTGGGTTTGGTTTTGTCGTTTGTTCAATCCTCACTGTCCTTCCAATTTTCAAATGGATGGCACAACAATGCAATGAAGGTGAGCCAGTCGATGAGTTATACATATGTGCTACATTAGCTGCTGTTCTGGCTGCTGGGTTTGTCACTGATGCTATTGGAATTCATGCCATGTTTGGCGCGTTCGTTTTTGGAATTTTGATTCCGAAAGATGGACCATTTGCTGGTGCTCTTGTGGAGAAAATAGAGGATCTTGTATCTGGTCTATTGCTCCCACTCTATTTTGTGTCAAGTGGATTGAAGACCGACGTAGCCACCATTCAGGGGCTGCAGTCATGGGGTCTTCTAGTTTTCGTTACATTTACGGCTTGTTTTGGGAAGATTGTTGGAACTATTGTAGCGTCTCTTTTATGTAAAGTGCCTTTTAATGAGTCTTTGGTGCTTGGATTCTTGATGAACAGTAAAGGCTTGGTCGAGCTAATTGTCCTCAACATCGGTAAAGATAGAAAgGTTTTGAATGATCAGACCTTTGCCATCATGGTTCTCATGGCTCTCTTTACTACCTTCATGACAACTCCTCTTGTGCTGGCTGCGTATAAGAGGAAGGCAAGAAAATCTGATTACAAATACAGAacaattgaaaggaaaaatgcAGACAGCCAACTGAGGATTCTTGCCTGTTTCCATGGTGCAAGGAATATTCCGTCGGTGATAAATTTGATCGAGACTTCAAGAGGAATCAAGAAGCATGGCGCACTTCGTGTGTATGCAATGCACCTTAAAGAATTTTCCGAGAGGTCCTCATCAATACTAATGATACAAAAGGTTAGAGAAAATGGGTTGCCGTTTTGGAACGAAAGTCGCCATGGAGATTCTGTACATGTTATTGTGGCGTTTGAGGCTTACCAGAAACTAAGCCAAGTTTGTGTCCGGCCAATGATAGCAATCTCCTCAATAGCTAGCATTCATGAAGACATATGTGCAACCGCTGAAAGAAAGAGAGCCGCAATCATCATTCTCCCATTTCATAAGCAACAAAGATTAGACGGTTCACTAGACATTATAAGAAATGATTATCGATATGTAAACAAAAGGGTACTTGAGCATGCACCGTGCTCAGTTGGAATTTTTGTTGATCGCGGGCTTGGTGGTACATGTCATGTGCCTGCAAGTAATGTTTCCTTTTGCATTGCTGTGCTTTTCTTTGGTGGTGGTGATGACCGTGAAGCTCTTGCTTATGCAGCTCGTATGGCCGAGCACCCTGGAATACGATTAGTGGTTACTCGCTTCTTAGTGGAACCTAATATTGCAGGCGAGATTACGAGAATTGACGTTGGAGACTCTTCTAGCAGTAATTCAATCTCAGAGGATGAGGAGTTCCTTGCGGAATTTAAGCTGAAAACAGAAAGTGATGACTCCGTTATctatgaagaaaaaatagtaaaagatgCTGCAGAAACAGTTGCTACTATACGCAAGTTTAATTCCTGCAATCTGTTTCTTGTTGGTATAAGGCCAACCGGTGAATTGGCCTGTGCTCTGGGAAGAAGCGAGTGCTCGGAACTAGGACCTATCGGGGGCTTGTTGGCATCCCAAGATTTCGCCACAACAGCATCGGTTTTGGTGATGCAACAGTATCCCAATAGAATACCAACAAATTCTGGCTCAGAAATGGAGGAACAGTCACCTGATGGAGACACCGAATCTTGTTAA 2406 0.4256 MTSNTTSGNGCSAPMQSTSNGVFQGDNPLEYALPLAILQICLVLVVTRGLAYLLKPLRQPRVIAEIVGGILLGPSALGRNKSYLHAVFPPKSLTVLDTLANLGLIFFLFLAGIELDPKSLRKTGGRVLAIAIAGISLPFALGIGSSFVLQATIAKGVNTSAFLVYMGVALSITAFPVLARILAELKLLTTSVGRMAMSAAAVNDVAAWILLALAVALSGNSQSPFVSLWVFLSGFGFVVCSILTVLPIFKWMAQQCNEGEPVDELYICATLAAVLAAGFVTDAIGIHAMFGAFVFGILIPKDGPFAGALVEKIEDLVSGLLLPLYFVSSGLKTDVATIQGLQSWGLLVFVTFTACFGKIVGTIVASLLCKVPFNESLVLGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALFTTFMTTPLVLAAYKRKARKSDYKYRTIERKNADSQLRILACFHGARNIPSVINLIETSRGIKKHGALRVYAMHLKEFSERSSSILMIQKVRENGLPFWNESRHGDSVHVIVAFEAYQKLSQVCVRPMIAISSIASIHEDICATAERKRAAIIILPFHKQQRLDGSLDIIRNDYRYVNKRVLEHAPCSVGIFVDRGLGGTCHVPASNVSFCIAVLFFGGGDDREALAYAARMAEHPGIRLVVTRFLVEPNIAGEITRIDVGDSSSSNSISEDEEFLAEFKLKTESDDSVIYEEKIVKDAAETVATIRKFNSCNLFLVGIRPTGELACALGRSECSELGPIGGLLASQDFATTASVLVMQQYPNRIPTNSGSEMEEQSPDGDTESC 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00244 801 Gene3D - 35 439 IPR038770 -
Tsu05g00244 801 PANTHER CATION/H + ANTIPORTER 7 792 - -
Tsu05g00244 801 PANTHER CATION/H(+) ANTIPORTER 18 7 792 - -
Tsu05g00244 801 MobiDBLite consensus disorder prediction 779 801 - -
Tsu05g00244 801 Pfam Sodium/hydrogen exchanger family 42 426 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00244 Tsu-Chr5 1794761 1797506 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00244 5 777 Antiporter Super Family AT5G41610 67.305 0.0 1036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00244 - - gmx:100810155 1221.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00244 05 1794761 1797506 Tsu05g00244 05 1794761 1797506 ECH