Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00243 ATGACTTCGAATACTACATCTGGAAATGTTTGCCCGCCGCCAATGAAGCCTGCATCTAATGGTGTATTTCAGGGAGATCACCCTCTTGATTATGCACTTCCCTTGGCTATTTTGCAGATATGCCTTGTTCTTGTAGTCACAAGGGGATTGGCTTATCTTCTAAAACCTTTAAGGCAACCGCGAGTTATTGCAGAGATTGTTGGAGGAATACTACTTGGGCCATCAGCACTTGGACGGAATAAAAGCTATCTACATGCAGTTTTCCCACCCAAAAGTCTTCCGGTATTAGATACTCTAGCAAACCTTGgtcttatattctttctatttttagCAGGCATAGAGTTAGATCCCAAATCACTTCGGAAAACTGGAGGCCGAGTCCTTGCAATTGCTATGGTCGGAATAAGCTTACCCTTTGCACTAGGGATTGGTTCATCATTTGTTCTGAAAGAAACAATTGCCAAAGATGTAAATACTTCCGCATTTCTCGTATACATGGGAGTTGCCCTGTCTATAACTGCATTTCCTGTATTAGCCCGTATTTTGGCTGAGTTAAAACTTCTAACCACCAGTGTCGGACGAATGGCTATGTCGGCTGCAGCAGTTAATGACGTAGCTGCCTGGATTCTTCTTGCTCTGGCTGTTGCCTTATCAGGAAATACCCAATCTCCACTTGTGTCATTATGGGTCTTCTTAAGTGGGATTGGTTTTGTCATTTGTTCGATCCTCATTGTCCTTCCAATTTTCAAATGGATGGCCCAACAATGCCATGAAGGTGAGCCGGTCGATGAGTTATACATATGTGCTACATTAGCTGCTGTTCTGGCTGCTGGGTTTGTCACAGATGCTATTGGAATTCATGCCATGTTTGGTGCATTTGTTTTTGGAATTTTGATTCCGAAAGATGGACCATTTTCCGGCGCTCTTGTGGAGAAAATAGAGGATCTTGTGTCTGGTCTATTGCTCCCACTCTATTTTGTGTCAAGTGGATTGAAGACTGATGTAGCCACCATTCACGGGCTGCAGTCATGGGGTCTTCTAGTTTTCGTTACATTTACTGCTTGTTTTGGGAAGATTGTTGGGACTATTGTAGTGTCTCTTTTATGTAAAGTGTCTTTTAATGAGTCTGTAGTGCTTGGATTCTTGATGAATAGTAAAGGCTTGGTTGAATTAATTGTCCTCAACATCGGTAAAGAGAGAAAGGTTTTGAATGATCAAACCTTTGCCATTATGGTTCTCATGGCTCTCGTTACTACCTTCATGACCACTCCTCTTGTGATGGTTGTGTACAAGAGGAAAGCAAGAGTATCTGATTACAAATACAAAACAATTGAAAGGAAAATTGCAGACAGCCAATTGAGGATTCTTGTCTGCTTCCATGGTGCAAGGAATATTCCATCGGTAATAAATTTGATTGAGACTTCAAGAGGAATCAAGAAGCGTGACGCACTTTGTGTGTATGCAATGcaccttaaagaattttctgaGAGGTCCTCATCAATACTAATGGCACAAAAGGTAAGAAAAAACGGATTGCCATTTTGGAATAAAGGTCACCGCGCGAATTCTGACCATGTTATTGTGGCATTTGAGGCTTACCAAAAACTAAGCCAAGTTTGTGTCCGGCCAATGATAGCAATTTCTGCGATAGCTAACATTCATGAAGACATATGTGCAACCGCTGAAAGAAAGAGAGCCGCAATCATCATTCTCCCATTTCATAAGCATCAAAGATTAGACGGTTCACTTGACATTACAAGAAATGATTTTCGATTGGTTAACAAAAGGGTACTCGAGCGGGCACCATGCTCAGTTGGAATTTTTGTTGATCGCGGGCTTGGTGGTACCTGTCATGTGTCTGCAAGTAATGTTTCTTATTGTGTTTCTGTGCTTTTCTTTGGCGGTGGTGATGATCGTGAAGCTCTTGCTTATGGAGCTCGTATGGCTGAGCACCCTGGCATAAAATTAGTGGTTATTCGTTTCTTagtggaaacaaatattttaggGGAGATTACCAGAGTTGACGTTGGAGAATCATCTAGCGGTAAATCAATCTCAGAGGATGAGGAATACCTTTCGGAATTTAAGCAGAAAACAGCTAGCGATGAATCTGTTATCTATGAAGAGAAAATAGTAAAAGATGCTGCAGAAACAGTTGCTGCTATCCGTGAGTTTAACTCCTGCAATCTGTTTCTTGTGGGTCTAAGGCCAACCGGTGAATTAGCCTGTGCTCTGGAAAGAAGTGACTGCCTGGAACTAGGACCTGTTGGTGGCTTGTTGGCATCCCAAGATTGCCCCACAACAGCATCAGTTTTGGTGATGCAACAGTATCACAATGAGGTGCCAGCGGATTTAGGCCCAGTAAAGGAGGAACATTCACCTGATGGAGACACAGAATCTGCCTGA 2406 0.4165 MTSNTTSGNVCPPPMKPASNGVFQGDHPLDYALPLAILQICLVLVVTRGLAYLLKPLRQPRVIAEIVGGILLGPSALGRNKSYLHAVFPPKSLPVLDTLANLGLIFFLFLAGIELDPKSLRKTGGRVLAIAMVGISLPFALGIGSSFVLKETIAKDVNTSAFLVYMGVALSITAFPVLARILAELKLLTTSVGRMAMSAAAVNDVAAWILLALAVALSGNTQSPLVSLWVFLSGIGFVICSILIVLPIFKWMAQQCHEGEPVDELYICATLAAVLAAGFVTDAIGIHAMFGAFVFGILIPKDGPFSGALVEKIEDLVSGLLLPLYFVSSGLKTDVATIHGLQSWGLLVFVTFTACFGKIVGTIVVSLLCKVSFNESVVLGFLMNSKGLVELIVLNIGKERKVLNDQTFAIMVLMALVTTFMTTPLVMVVYKRKARVSDYKYKTIERKIADSQLRILVCFHGARNIPSVINLIETSRGIKKRDALCVYAMHLKEFSERSSSILMAQKVRKNGLPFWNKGHRANSDHVIVAFEAYQKLSQVCVRPMIAISAIANIHEDICATAERKRAAIIILPFHKHQRLDGSLDITRNDFRLVNKRVLERAPCSVGIFVDRGLGGTCHVSASNVSYCVSVLFFGGGDDREALAYGARMAEHPGIKLVVIRFLVETNILGEITRVDVGESSSGKSISEDEEYLSEFKQKTASDESVIYEEKIVKDAAETVAAIREFNSCNLFLVGLRPTGELACALERSDCLELGPVGGLLASQDCPTTASVLVMQQYHNEVPADLGPVKEEHSPDGDTESA 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00243 801 PANTHER CATION/H + ANTIPORTER 7 785 - -
Tsu05g00243 801 MobiDBLite consensus disorder prediction 784 801 - -
Tsu05g00243 801 Pfam Sodium/hydrogen exchanger family 42 426 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu05g00243 801 Gene3D - 35 438 IPR038770 -
Tsu05g00243 801 PANTHER CATION/H(+) ANTIPORTER 18 7 785 - -
Tsu05g00243 801 MobiDBLite consensus disorder prediction 782 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00243 Tsu-Chr5 1788121 1792257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00243 5 799 Antiporter Super Family AT5G41610 67.079 0.0 1055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00243 - - gmx:100810155 1237.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00243 05 1788121 1792257 Tsu05g00243 05 1788121 1792257 ECH