Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00235 ATGGAACAATTCCGGCATATTGGTGAGGTTCTTGGAAGCCTAAAAGCGCTTATGGTTTTACGCGatgaaattcaaatcaatcaacGACAATGTTGTTTGATCCACGACATATTCAGTCTAGCATTCGACACAATCTCAGACGAGATAAGGCAGAATCTAAAGCTTGATGAAAGAGCTACCAAATGGAAACCTCTTGAATTTCCTCTCCGAGAGCTTTCCAGGGTTTTCAAAGAAGGTGAACTATACATCAAGCAATGTTTGGACTCAAAAGATTGGTGGGGGAAATCATTGACACTTTCTCAGAACCGAGATTGCGTCGAGTTTCACATTCATAACTTGCTTTGTTATTTCCCTGCGGTTATTGAAGCGATCGAGAGTGCTGGTGAGATGTCGGGTTTGGATCAAGATGAGAATTCCAAGAAGAAAGTTATGCTTGCAAGAAAATATGATGTGGAATGGAATGATCCAAAACTTTTTCAATGGAGATTTGGTAAACAATATTTGGTTCCAAAGGAGATTTGCAACCAATTGGAGAATGCTTGGAGAGAAGATAGATGGAGGCTCATAGAATCACTCAAAGAGAAAAAAGGTTCTTCCAAACTCACTTGTTCAAAGAATGAGCAACAATTTGCTGAGATGTTGTTGAAGAAACTATTGAATGGTTCAGAAAAAACCAACAATAGTAATAACAACAAGATTCTGTGGCCAATTTCGATTTTGATAGGATCGAAAGATTACCAAGTGAGGAGAAGATTGGGAAGAGGAAAAGAATTCAAGGAAATTCAATGGTTAGGACAAAGTTTTGCTGTGAGGCATTTTGTTGGGGAGAAAGAAGCTTATGAAAATGAGATTTTCAATTTGTTATCACTTTCTCACCCTAACATATTGCAATATCTATGTGGTTTTTATGATGATGGTAAGAAAGAGTTTTCACTTGTGATAGAGTTAATGAACAAAGATTTATGGACATACATGAAAGAAAATTGTGGTCCAAGGAGACAGATTTTGTTCTCTATACCTGTTGTGGTTGATCTCATGCTTCAAATGGCTAGAGGCATTGAATATCTTCACACCAAAAAAATTTACCATGGAAACCTTAATCCTTGTAATATCCTACTAAGAGCAAGAAACTCACAAGAAGGTTTCTTTCAAGCAAAAGTTGTAGGATTCGGTTTGTCATCTGTGACAAATGGTGACAATACTACTAGAACCTCACCGACAAATAACCCTATTATGGATGAGATTAACCCTTCAGTTTGGTATGCACCTGAGGTTTTAACTGAGCTAGAACAAATGAAAAATGGTTCAACTTCTTGCAAGTACTCAGAGAAAGCCGATGCATATAGCTTCGGTATGATATGTTTTGAGTTGTTGACAGGGAAAGTTCCTTTTGAGGATAACCATCTTCAAGGAGATAGGACTAGCCAAAATATCATAGCAGGAGAAAGACCTTTGTTTCCATATCATTCTCCGAAATATCTtgtgagtttgataaaaaaatgttggcAAACTGATCCGTCTCAGCGTCCTACTTTCTCGTCTATTTGTAGGATTTTGCGCTACAccaaaaaatttctttcaatGAACAGTGAGTATGTTATGATCAATCCTGAACTCAATCAGCTTGAACTTCAGAACCCACCTGTAGATTGTTGTGACCTTGAAGGAATGTTCTTTAAAAGTTTTCCAATGGAAAAGACAAATAACACTGTTTCACAAATACCTTATGAAATGTTTGCTTACAAAGTTGTTGAGAAAGGGAAGATCAATAATCAGAATCAGAGTAATACTCCTACTAAAGATAAATGCTGTGAGTGTGAGCCAACAAAGGATGAGGTTATTGTATGTGGGGAAGAAAATGAACAAATCGGAGTTTATACAGATGCTAATGCATCCATAATGGAAGATCTAACAGCTTATaccaaatcaatttttgttgacaCACAGTCTAGTTCTTCTGATTCCCCACCAAGGAAGAGTGTTACAATAAAGACACCATCAGAAATGAAGCCAAAGAAAGTCCAAGGAACTCGAAAATTGCAAGCGACAAGATCATTACCATCATTATCTGGTCGCATTTCAAGGACAAATAAGGTGAATCTGTCATCATCTAACCCTCTAAGCCCAGGTAAAAGAAGACCTACCAAAGTCTCATCAGAATCGGAGCGCAAAGGGAATCAATCACCATTACTGTCAACTTCAAGCACAGTTAGAAGAAAAACATATGAAGGAGGCAATGTATCAGATTCCAAGCCTAGTTTAAAGCTGAAAACAAGAGACCAATCACCATTTAACAGTTTAAAGACAAGAAAACCACAACTTCCCTCGAGTCCTTCTTCGAGTCCGATAAGAATGAGAAATGTCAAAAGTACTAATAACGCCTCTAGTGTGCGGATGCAAAAAGGGTTCATTTCAACACCTCCAATGACTCCTTTGAGGACATTCACAAGCAAAAAAGGTGGTCATGTTTCAGATATGGATAGTTTGAAGATACGAGGTAGATTGTCAGCATATGGATTGAGTCCCTTGAGTCCATATGCGATCAATCACAAGACTAAAGGAGACATGTCACCATTTACATTGTCCCCTTTGAGTCCGTATGCAAGAGAAACATGTGGTCATGTCTCGGATTAA 2634 0.3698 MEQFRHIGEVLGSLKALMVLRDEIQINQRQCCLIHDIFSLAFDTISDEIRQNLKLDERATKWKPLEFPLRELSRVFKEGELYIKQCLDSKDWWGKSLTLSQNRDCVEFHIHNLLCYFPAVIEAIESAGEMSGLDQDENSKKKVMLARKYDVEWNDPKLFQWRFGKQYLVPKEICNQLENAWREDRWRLIESLKEKKGSSKLTCSKNEQQFAEMLLKKLLNGSEKTNNSNNNKILWPISILIGSKDYQVRRRLGRGKEFKEIQWLGQSFAVRHFVGEKEAYENEIFNLLSLSHPNILQYLCGFYDDGKKEFSLVIELMNKDLWTYMKENCGPRRQILFSIPVVVDLMLQMARGIEYLHTKKIYHGNLNPCNILLRARNSQEGFFQAKVVGFGLSSVTNGDNTTRTSPTNNPIMDEINPSVWYAPEVLTELEQMKNGSTSCKYSEKADAYSFGMICFELLTGKVPFEDNHLQGDRTSQNIIAGERPLFPYHSPKYLVSLIKKCWQTDPSQRPTFSSICRILRYTKKFLSMNSEYVMINPELNQLELQNPPVDCCDLEGMFFKSFPMEKTNNTVSQIPYEMFAYKVVEKGKINNQNQSNTPTKDKCCECEPTKDEVIVCGEENEQIGVYTDANASIMEDLTAYTKSIFVDTQSSSSDSPPRKSVTIKTPSEMKPKKVQGTRKLQATRSLPSLSGRISRTNKVNLSSSNPLSPGKRRPTKVSSESERKGNQSPLLSTSSTVRRKTYEGGNVSDSKPSLKLKTRDQSPFNSLKTRKPQLPSSPSSSPIRMRNVKSTNNASSVRMQKGFISTPPMTPLRTFTSKKGGHVSDMDSLKIRGRLSAYGLSPLSPYAINHKTKGDMSPFTLSPLSPYARETCGHVSD 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00235 877 Pfam Protein tyrosine and serine/threonine kinase 276 518 IPR001245 GO:0004672|GO:0006468
Tsu05g00235 877 MobiDBLite consensus disorder prediction 721 795 - -
Tsu05g00235 877 Pfam Protein of unknown function (DUF1221) 21 243 IPR010632 -
Tsu05g00235 877 MobiDBLite consensus disorder prediction 647 795 - -
Tsu05g00235 877 SUPERFAMILY Protein kinase-like (PK-like) 243 544 IPR011009 -
Tsu05g00235 877 ProSiteProfiles Protein kinase domain profile. 246 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g00235 877 MobiDBLite consensus disorder prediction 678 714 - -
Tsu05g00235 877 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 731 - -
Tsu05g00235 877 MobiDBLite consensus disorder prediction 647 662 - -
Tsu05g00235 877 Gene3D Transferase(Phosphotransferase) domain 1 237 544 - -
Tsu05g00235 877 PANTHER SERINE-THREONINE PROTEIN KINASE 1 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00235 Tsu-Chr5 1719372 1722409 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00235 245 532 MAP Kinase Kinase Kinase AT1G14000 29.139 4.80e-23 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Tsu05g00235 PK_Tyr_Ser-Thr 1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00235 - - cam:101509043 1271.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g00235 05 1719372 1722409 Tsu05g00235 05 1719372 1722409 ECH