Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g00198 ATGTTAAGAGAGTTGATGAAAATGAACACTCTACTGTTAAATTTTTTACAGGCTGTCTATGGCACTCTTTTTGAAGCCGAACATAGATCCACTTTCTATATTCCATATTGGAAACTTCCGTTAGCAAGTTGGATAGTACCCAGACAAAGGAAGTTTCAGAAGGACCTTAAGGTCATTAATGCTTGTCTTGACGGActtataaaaaatgcaaaagagAGCAGGGAGGAAACAGATGTTGAGAAACTGCAGCAAAGGGATTACTCAAATTTGaagGATGCAAGTCTTCTGCGTTTCCTAGTTGATATGCGGGGAGTTGATGTTGATGATCGTCAGTTGAGGGATGATTTAATGACAATGCTTATTGCTGGTCATGAGACGACGGCTGCAGTTCTTACATGGGCAGTTTTCCTGCTAGCTCAAAATCCTGACAAAATGAAGAAGGCTCAAGCAGAGGTAGATTCGGTGCTGGGTACAGGGAGGCCAACTTTTGAATTGCTTAAAAAGTTGCAGTACATCAGGTTAATTGTTGTGGAGGCTCTTCGATTATATCCACAACCACCTCTGCTGATTAGACGTTCACTCAAATCTGATGTTTTACCAGGAGGTTATAAAGGTGACAAAGATGGTTATAGAATTCCTGCTGGGACTGATGTCTTCATTTCTGTATATAATCTCCACCGATCTCCATATTTTTGGGACCGCCCTGATGACTTTGAGCCTGAGAGATTTCTAGTGCAAAACAagaatgaagaaattgaagggTGGGCTGGTTTTGACCCATCTCGAAGTCCTGGAGCCTTGTATCCAAACGAGGTTATATCGGATTTTGCCTTCTTGCCTTTTGGTGGTGGACCTCGAAAATGTGTTGGGGACCAATTTGCTCTAATGGAGTCCACTGTAGCACTGACTATGCTACTACAGAAGTTCGACGTGGAATTGAAGGGGACCCCTGAATCGGTCGAACTAGTTACCGGGGCAACTATACATACCAAAAATGGATTGTGGTGCAATTTGAGGAAGAGATCATCTAAACATTGA 1038 0.4094 MLRELMKMNTLLLNFLQAVYGTLFEAEHRSTFYIPYWKLPLASWIVPRQRKFQKDLKVINACLDGLIKNAKESREETDVEKLQQRDYSNLKDASLLRFLVDMRGVDVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPDKMKKAQAEVDSVLGTGRPTFELLKKLQYIRLIVVEALRLYPQPPLLIRRSLKSDVLPGGYKGDKDGYRIPAGTDVFISVYNLHRSPYFWDRPDDFEPERFLVQNKNEEIEGWAGFDPSRSPGALYPNEVISDFAFLPFGGGPRKCVGDQFALMESTVALTMLLQKFDVELKGTPESVELVTGATIHTKNGLWCNLRKRSSKH 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g00198 345 PANTHER CYTOCHROME P450 FAMILY 4 17 341 - -
Tsu05g00198 345 Gene3D Cytochrome P450 6 345 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00198 345 SUPERFAMILY Cytochrome P450 27 341 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00198 345 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 281 290 IPR017972 GO:0005506|GO:0016705
Tsu05g00198 345 PRINTS P450 superfamily signature 122 139 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00198 345 PRINTS P450 superfamily signature 288 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00198 345 PRINTS P450 superfamily signature 174 185 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00198 345 PRINTS P450 superfamily signature 279 288 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00198 345 PANTHER CYTOCHROME P450 97B3, CHLOROPLASTIC 17 341 - -
Tsu05g00198 345 PRINTS E-class P450 group I signature 278 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00198 345 PRINTS E-class P450 group I signature 111 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00198 345 PRINTS E-class P450 group I signature 288 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00198 345 PRINTS E-class P450 group I signature 131 157 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g00198 345 Pfam Cytochrome P450 36 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g00198 Tsu-Chr5 1439654 1443352 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g00198 16 342 Cytochrome P450 AT4G15110 80.734 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g00198 K24543 - gmx:606504 619.002